Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.44■□□□□ 0.7
CDX4O14627 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
CDX4O14627 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDX4O14627 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDX4O14627 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDX4O14627 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDX4O14627 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.43■□□□□ 0.7
CDX4O14627 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.43■□□□□ 0.7
CDX4O14627 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CDX4O14627 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDX4O14627 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDX4O14627 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDX4O14627 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDX4O14627 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.43■□□□□ 0.7
CDX4O14627 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.43■□□□□ 0.7
CDX4O14627 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDX4O14627 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.43■□□□□ 0.7
CDX4O14627 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.43■□□□□ 0.7
CDX4O14627 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CDX4O14627 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDX4O14627 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.43■□□□□ 0.7
CDX4O14627 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDX4O14627 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.43■□□□□ 0.7
CDX4O14627 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDX4O14627 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.42■□□□□ 0.7
CDX4O14627 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDX4O14627 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDX4O14627 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.42■□□□□ 0.7
CDX4O14627 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDX4O14627 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDX4O14627 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDX4O14627 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDX4O14627 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDX4O14627 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.42■□□□□ 0.7
CDX4O14627 HLA-G-202ENST00000376815 851 ntBASIC19.42■□□□□ 0.7
CDX4O14627 HLA-G-203ENST00000376818 1127 ntBASIC19.42■□□□□ 0.7
CDX4O14627 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.42■□□□□ 0.7
CDX4O14627 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.42■□□□□ 0.7
CDX4O14627 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CDX4O14627 AC097488.1-201ENST00000507834 756 ntBASIC19.42■□□□□ 0.7
CDX4O14627 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.42■□□□□ 0.7
CDX4O14627 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.42■□□□□ 0.7
CDX4O14627 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.42■□□□□ 0.7
CDX4O14627 C1QL1P1-201ENST00000568105 661 ntBASIC19.42■□□□□ 0.7
CDX4O14627 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.42■□□□□ 0.7
CDX4O14627 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CDX4O14627 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDX4O14627 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDX4O14627 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDX4O14627 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.41■□□□□ 0.7
CDX4O14627 PTBP1P-201ENST00000554374 1601 ntBASIC19.41■□□□□ 0.7
CDX4O14627 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.41■□□□□ 0.7
CDX4O14627 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDX4O14627 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDX4O14627 AC009947.2-201ENST00000444014 672 ntBASIC19.41■□□□□ 0.7
CDX4O14627 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.41■□□□□ 0.7
CDX4O14627 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDX4O14627 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDX4O14627 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CDX4O14627 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDX4O14627 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDX4O14627 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDX4O14627 C9orf163-202ENST00000624034 2573 ntBASIC19.4■□□□□ 0.7
CDX4O14627 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDX4O14627 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDX4O14627 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDX4O14627 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDX4O14627 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDX4O14627 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.4■□□□□ 0.7
CDX4O14627 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.4■□□□□ 0.7
CDX4O14627 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.4■□□□□ 0.7
CDX4O14627 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.4■□□□□ 0.7
CDX4O14627 AC139887.4-201ENST00000607877 719 ntBASIC19.4■□□□□ 0.7
CDX4O14627 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.4■□□□□ 0.7
CDX4O14627 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.4■□□□□ 0.7
CDX4O14627 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.4■□□□□ 0.7
CDX4O14627 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDX4O14627 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.39■□□□□ 0.7
CDX4O14627 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDX4O14627 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.39■□□□□ 0.7
CDX4O14627 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
CDX4O14627 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDX4O14627 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.39■□□□□ 0.69
CDX4O14627 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CDX4O14627 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDX4O14627 RNF152P1-201ENST00000397754 604 ntBASIC19.39■□□□□ 0.69
CDX4O14627 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.39■□□□□ 0.69
CDX4O14627 KRT18P48-201ENST00000434763 852 ntBASIC19.39■□□□□ 0.69
CDX4O14627 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.39■□□□□ 0.69
CDX4O14627 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDX4O14627 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.39■□□□□ 0.69
CDX4O14627 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDX4O14627 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDX4O14627 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.39■□□□□ 0.69
CDX4O14627 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.39■□□□□ 0.69
CDX4O14627 AL138966.2-201ENST00000621997 464 ntBASIC19.39■□□□□ 0.69
CDX4O14627 AP000550.4-202ENST00000639755 178 ntBASIC19.39■□□□□ 0.69
CDX4O14627 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDX4O14627 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDX4O14627 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms