Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
NPIPB4C9JG80 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 GPX1P1-201ENST00000388829 606 ntBASIC17.76■□□□□ 0.43
NPIPB4C9JG80 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 BX276092.2-201ENST00000417668 665 ntBASIC17.76■□□□□ 0.43
NPIPB4C9JG80 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 AC092118.2-201ENST00000613495 667 ntBASIC17.76■□□□□ 0.43
NPIPB4C9JG80 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB4C9JG80 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.75■□□□□ 0.43
NPIPB4C9JG80 AC006970.2-201ENST00000450065 779 ntBASIC17.75■□□□□ 0.43
NPIPB4C9JG80 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB4C9JG80 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB4C9JG80 AFG3L1P-217ENST00000557444 2447 ntBASIC17.73■□□□□ 0.43
NPIPB4C9JG80 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 MIPEPP3-201ENST00000412105 444 ntBASIC17.73■□□□□ 0.43
NPIPB4C9JG80 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 NCF1B-203ENST00000435988 1254 ntBASIC17.73■□□□□ 0.43
NPIPB4C9JG80 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB4C9JG80 PHGDH-210ENST00000641115 1638 ntBASIC17.72■□□□□ 0.43
NPIPB4C9JG80 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
NPIPB4C9JG80 AC125437.2-201ENST00000625180 2167 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms