Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
PLEKHD1A6NEE1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
PLEKHD1A6NEE1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC31.03■■■□□ 2.56
PLEKHD1A6NEE1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PLEKHD1A6NEE1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
PLEKHD1A6NEE1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
PLEKHD1A6NEE1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
PLEKHD1A6NEE1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PLEKHD1A6NEE1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PLEKHD1A6NEE1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PLEKHD1A6NEE1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
PLEKHD1A6NEE1 AC087388.1-201ENST00000571370 1112 ntBASIC31.02■■■□□ 2.56
PLEKHD1A6NEE1 AC026271.3-201ENST00000571884 352 ntBASIC31.02■■■□□ 2.56
PLEKHD1A6NEE1 AP005242.2-201ENST00000580065 1175 ntBASIC31.02■■■□□ 2.56
PLEKHD1A6NEE1 AL445675.2-201ENST00000620291 557 ntBASIC31.02■■■□□ 2.56
PLEKHD1A6NEE1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
PLEKHD1A6NEE1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.56
PLEKHD1A6NEE1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC31.01■■■□□ 2.56
PLEKHD1A6NEE1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC31.01■■■□□ 2.56
PLEKHD1A6NEE1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
PLEKHD1A6NEE1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.56
PLEKHD1A6NEE1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 C2orf69P3-201ENST00000565542 1120 ntBASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 ABBA01031674.1-201ENST00000635145 728 ntBASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.55
PLEKHD1A6NEE1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PLEKHD1A6NEE1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC31■■■□□ 2.55
PLEKHD1A6NEE1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC31■■■□□ 2.55
PLEKHD1A6NEE1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PLEKHD1A6NEE1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC31■■■□□ 2.55
PLEKHD1A6NEE1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PLEKHD1A6NEE1 EGLN1P1-201ENST00000531623 762 ntBASIC31■■■□□ 2.55
PLEKHD1A6NEE1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC31■■■□□ 2.55
PLEKHD1A6NEE1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
PLEKHD1A6NEE1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PLEKHD1A6NEE1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC31■■■□□ 2.55
PLEKHD1A6NEE1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC31■■■□□ 2.55
PLEKHD1A6NEE1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PLEKHD1A6NEE1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 AC121338.2-201ENST00000622535 1744 ntBASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 TSPY14P-201ENST00000303979 915 ntBASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PLEKHD1A6NEE1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
PLEKHD1A6NEE1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PLEKHD1A6NEE1 LIN28AP1-201ENST00000429574 405 ntBASIC30.98■■■□□ 2.55
PLEKHD1A6NEE1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC30.98■■■□□ 2.55
PLEKHD1A6NEE1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
PLEKHD1A6NEE1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC30.98■■■□□ 2.55
PLEKHD1A6NEE1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC30.98■■■□□ 2.55
PLEKHD1A6NEE1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PLEKHD1A6NEE1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PLEKHD1A6NEE1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC30.97■■■□□ 2.55
PLEKHD1A6NEE1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
PLEKHD1A6NEE1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC30.97■■■□□ 2.55
PLEKHD1A6NEE1 ECEL1P2-202ENST00000465689 757 ntBASIC30.97■■■□□ 2.55
PLEKHD1A6NEE1 B3GAT3P1-201ENST00000471720 806 ntBASIC30.97■■■□□ 2.55
PLEKHD1A6NEE1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC30.97■■■□□ 2.55
PLEKHD1A6NEE1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
PLEKHD1A6NEE1 DGCR10-201ENST00000609839 495 ntBASIC30.97■■■□□ 2.55
PLEKHD1A6NEE1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PLEKHD1A6NEE1 KRT8P17-201ENST00000453110 1448 ntBASIC30.97■■■□□ 2.55
PLEKHD1A6NEE1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
PLEKHD1A6NEE1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC30.96■■■□□ 2.55
PLEKHD1A6NEE1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC30.96■■■□□ 2.55
PLEKHD1A6NEE1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PLEKHD1A6NEE1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC30.96■■■□□ 2.55
PLEKHD1A6NEE1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC30.96■■■□□ 2.55
PLEKHD1A6NEE1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
PLEKHD1A6NEE1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
PLEKHD1A6NEE1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PLEKHD1A6NEE1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
PLEKHD1A6NEE1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC30.95■■■□□ 2.55
PLEKHD1A6NEE1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC30.95■■■□□ 2.55
PLEKHD1A6NEE1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms