Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 HLA-G-202ENST00000376815 851 ntBASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 HLA-G-203ENST00000376818 1127 ntBASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 TMEM179-206ENST00000616017 1645 ntBASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 KRT8P20-201ENST00000423953 1409 ntBASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 KRT16P6-202ENST00000425692 1426 ntBASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 AC133552.2-202ENST00000575694 574 ntBASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 AL031963.3-201ENST00000606441 850 ntBASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV6-4A0A1B0GX49 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 PCDHAC2-203ENST00000615316 3011 ntBASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 PTBP1P-201ENST00000554374 1601 ntBASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 AL137784.2-201ENST00000607332 1000 ntBASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 AC080038.1-201ENST00000611274 1154 ntBASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
TRBV6-4A0A1B0GX49 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms