Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TRBV27A0A0K0K1C4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TRBV27A0A0K0K1C4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 AC093503.3-201ENST00000624917 2352 ntBASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 AC091799.1-201ENST00000422823 811 ntBASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 AC091305.1-201ENST00000479476 895 ntBASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 DUX4L2-201ENST00000561772 1275 ntBASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 DUX4L6-201ENST00000626483 1275 ntBASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 DUX4L1-201ENST00000627662 1275 ntBASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 DUX4L8-201ENST00000629013 1275 ntBASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 DUX4L3-201ENST00000630187 1275 ntBASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 DUX4L7-201ENST00000630678 1275 ntBASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 DUX4L5-201ENST00000630834 1275 ntBASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV27A0A0K0K1C4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 PGM5P4-201ENST00000421970 445 ntBASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 AC106739.1-201ENST00000617035 715 ntBASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV27A0A0K0K1C4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV27A0A0K0K1C4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms