Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 PTBP1P-201ENST00000554374 1601 ntBASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 AC004854.2-201ENST00000608450 1441 ntBASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV5-5A0A0J9YX44 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV5-5A0A0J9YX44 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-5A0A0J9YX44 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 CYP21A1P-202ENST00000354927 1481 ntBASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
TRBV5-5A0A0J9YX44 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms