Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 AC016405.3-201ENST00000607710 860 ntBASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 AC011767.1-201ENST00000617410 1153 ntBASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 AC099778.1-201ENST00000568593 1911 ntBASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 DPP3P2-201ENST00000416030 1696 ntBASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 AL158211.5-201ENST00000623583 2518 ntBASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV4A0A0B4J268 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 MCRIP2P1-201ENST00000394346 511 ntBASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 AL162430.1-201ENST00000480705 870 ntBASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 RARRES2P4-201ENST00000514074 484 ntBASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 DUX4L16-201ENST00000555130 1264 ntBASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 AC231657.2-201ENST00000624556 255 ntBASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV4A0A0B4J268 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 SMG8-203ENST00000578922 2178 ntBASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 LETM1P2-201ENST00000597330 2178 ntBASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 AC069236.1-201ENST00000604339 616 ntBASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 AC008694.1-202ENST00000636953 945 ntBASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 AC087289.5-201ENST00000586076 3175 ntBASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV4A0A0B4J268 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV4A0A0B4J268 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms