Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 ARMC10P1-201ENST00000313754 855 ntBASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 MIR1238-201ENST00000408483 83 ntBASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC187A0A096LP49 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 KSR1P1-201ENST00000446298 240 ntBASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 AC244015.2-201ENST00000616358 1861 ntBASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC187A0A096LP49 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 KRT8P9-201ENST00000558927 1449 ntBASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 LINC01568-207ENST00000641790 1380 ntBASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC187A0A096LP49 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 AC005521.1-201ENST00000393351 872 ntBASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 NIFKP9-201ENST00000419265 221 ntBASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 NAPSB-206ENST00000562112 1266 ntBASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 CR392000.1-201ENST00000624770 1228 ntBASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC187A0A096LP49 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
CCDC187A0A096LP49 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC187A0A096LP49 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC187A0A096LP49 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 AC113347.1-201ENST00000413321 391 ntBASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 AC116562.2-201ENST00000507042 360 ntBASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC187A0A096LP49 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC187A0A096LP49 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19■□□□□ 0.63
CCDC187A0A096LP49 KRT16P1-201ENST00000399124 1418 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms