Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC6.57□□□□□ -1.36
LINC00346Q8IVM7 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
LINC00346Q8IVM7 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.57□□□□□ -1.36
LINC00346Q8IVM7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LINC00346Q8IVM7 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LINC00346Q8IVM7 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.57□□□□□ -1.36
LINC00346Q8IVM7 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
LINC00346Q8IVM7 AL359694.2-201ENST00000567753 1615 ntBASIC6.57□□□□□ -1.36
LINC00346Q8IVM7 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.57□□□□□ -1.36
LINC00346Q8IVM7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LINC00346Q8IVM7 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.57□□□□□ -1.36
LINC00346Q8IVM7 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
LINC00346Q8IVM7 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LINC00346Q8IVM7 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AL355974.1-201ENST00000618896 1708 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AL078621.1-201ENST00000272567 768 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 COQ3-202ENST00000369240 646 ntTSL 5 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 RNA5SP18-201ENST00000390935 121 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 RPS29P5-201ENST00000452777 171 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 MRPS21P1-201ENST00000453850 223 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 OR7L1P-201ENST00000456181 380 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC015820.1-201ENST00000473882 321 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 RPL22-208ENST00000497965 786 ntTSL 2 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC095059.2-201ENST00000510601 933 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC114801.1-201ENST00000512633 297 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC008676.3-201ENST00000521237 435 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC105275.2-201ENST00000567907 711 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 TUBAP4-201ENST00000569261 416 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 MIR4793-201ENST00000577502 87 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC015674.1-201ENST00000578482 267 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC022239.4-201ENST00000602626 504 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 NF1P10-201ENST00000613227 742 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 RN7SL680P-201ENST00000620379 299 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AP003068.4-201ENST00000623192 802 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC002044.3-201ENST00000623314 541 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AL157831.2-201ENST00000564681 3095 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AP003471.1-202ENST00000319051 1988 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 AC011008.2-201ENST00000624866 3352 ntBASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LINC00346Q8IVM7 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 TRIM64EP-201ENST00000531233 1307 ntBASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
LINC00346Q8IVM7 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 342.8 ms