Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC50Q8IVM0 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AL078621.1-201ENST00000272567 768 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 OR5E1P-201ENST00000305754 927 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AC245047.1-201ENST00000433276 873 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 RPL4P2-201ENST00000447259 1282 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 RPS14P7-201ENST00000473701 448 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AC095059.2-201ENST00000510601 933 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 OR7E87P-201ENST00000532397 929 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AC013283.1-201ENST00000557282 492 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AC100843.2-201ENST00000589084 324 ntTSL 5 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AC007136.1-201ENST00000589141 199 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AC013731.1-201ENST00000604340 883 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AC004852.1-201ENST00000605206 154 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 RN7SL680P-201ENST00000620379 299 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 OR4C1P-202ENST00000641065 1569 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 HSPD1P4-201ENST00000547203 1702 ntBASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC50Q8IVM0 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 AC011008.2-201ENST00000624866 3352 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 CUBNP3-201ENST00000457461 1784 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 AC074198.1-201ENST00000506546 1397 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 RNU1-16P-201ENST00000365477 164 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 SNX18P3-201ENST00000424993 835 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 RNF11P2-201ENST00000427702 440 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 AP006193.1-201ENST00000440724 485 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 AC011742.2-201ENST00000443818 352 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 RPS29P5-201ENST00000452777 171 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 MRPS21P1-201ENST00000453850 223 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 AC090680.1-201ENST00000464696 860 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 RN7SL621P-201ENST00000472565 299 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 RNA5SP422-201ENST00000516778 111 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 IGKV2-29-201ENST00000521304 372 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 AL513218.1-201ENST00000606527 391 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 AC005790.1-201ENST00000619774 450 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 SNORA43.5-201ENST00000631270 138 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 AC091544.5-201ENST00000620192 3815 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 SLC9B1P3-201ENST00000452667 1334 ntBASIC7.74□□□□□ -1.17
CCDC50Q8IVM0 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms