Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.88□□□□□ -1.31
SUMO3P55854 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 MFSD8-218ENST00000641186 4448 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AL512283.1-201ENST00000606756 1384 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 SNORD46-201ENST00000364043 104 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 RNU1-16P-201ENST00000365477 164 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 MIR575-201ENST00000385013 94 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 HMGB3P1-201ENST00000393368 573 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 IFNA12P-201ENST00000413147 571 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AC091492.1-201ENST00000419844 272 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.88□□□□□ -1.31
SUMO3P55854 MRPS33P4-201ENST00000434892 317 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.88□□□□□ -1.31
SUMO3P55854 OR3B1P-201ENST00000437536 893 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC6.88□□□□□ -1.31
SUMO3P55854 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC6.88□□□□□ -1.31
SUMO3P55854 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC6.88□□□□□ -1.31
SUMO3P55854 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.88□□□□□ -1.31
SUMO3P55854 RPS18P13-201ENST00000461260 454 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 RPL34P22-201ENST00000468193 318 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC6.88□□□□□ -1.31
SUMO3P55854 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.88□□□□□ -1.31
SUMO3P55854 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 MTND3P24-201ENST00000506306 329 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AC108120.1-201ENST00000506543 991 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.88□□□□□ -1.31
SUMO3P55854 AC106806.2-201ENST00000509365 500 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.88□□□□□ -1.31
SUMO3P55854 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
SUMO3P55854 KCTD9P6-201ENST00000522306 950 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC6.88□□□□□ -1.31
SUMO3P55854 OR7E2P-201ENST00000533071 889 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.88□□□□□ -1.31
SUMO3P55854 MTND2P17-201ENST00000550281 688 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC6.88□□□□□ -1.31
SUMO3P55854 AC093283.1-201ENST00000565306 1075 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC6.88□□□□□ -1.31
SUMO3P55854 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC6.88□□□□□ -1.31
SUMO3P55854 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC6.88□□□□□ -1.31
SUMO3P55854 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.88□□□□□ -1.31
SUMO3P55854 AL513548.2-201ENST00000602994 1207 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AC098483.2-201ENST00000603158 454 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AC024933.1-201ENST00000608472 348 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
SUMO3P55854 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AL353898.2-201ENST00000623000 255 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AC091059.2-201ENST00000623355 614 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC6.88□□□□□ -1.31
SUMO3P55854 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
SUMO3P55854 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SUMO3P55854 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
SUMO3P55854 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 THAP12P7-201ENST00000520248 2290 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 AP002833.3-201ENST00000625075 2265 ntBASIC6.88□□□□□ -1.31
SUMO3P55854 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.88□□□□□ -1.31
SUMO3P55854 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SUMO3P55854 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.87□□□□□ -1.31
SUMO3P55854 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
SUMO3P55854 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
SUMO3P55854 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC6.87□□□□□ -1.31
SUMO3P55854 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
SUMO3P55854 CD46-209ENST00000367047 3089 ntTSL 5 BASIC6.87□□□□□ -1.31
SUMO3P55854 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 OR51A10P-201ENST00000307165 937 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 RNU6-152P-201ENST00000384037 107 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 MIR181C-201ENST00000384881 110 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 MIR498-201ENST00000385134 124 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.87□□□□□ -1.31
SUMO3P55854 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.87□□□□□ -1.31
SUMO3P55854 IGKV1OR2-3-201ENST00000411475 288 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 VN1R33P-201ENST00000411800 887 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SUMO3P55854 MTND4LP14-201ENST00000429447 288 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC6.87□□□□□ -1.31
SUMO3P55854 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC6.87□□□□□ -1.31
SUMO3P55854 AL691517.1-201ENST00000440833 1235 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 RN7SL338P-201ENST00000481467 293 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 OR9N1P-201ENST00000491296 333 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 AC006070.1-201ENST00000508151 193 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.87□□□□□ -1.31
SUMO3P55854 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC6.87□□□□□ -1.31
SUMO3P55854 AC008677.3-201ENST00000519146 666 ntBASIC6.87□□□□□ -1.31
SUMO3P55854 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.87□□□□□ -1.31
SUMO3P55854 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC6.87□□□□□ -1.31
SUMO3P55854 AP003049.1-201ENST00000529418 457 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms