Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC9.19□□□□□ -0.94
COL15A1P39059 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC9.19□□□□□ -0.94
COL15A1P39059 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
COL15A1P39059 SNORA11.6-201ENST00000619030 128 ntBASIC9.19□□□□□ -0.94
COL15A1P39059 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
COL15A1P39059 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
COL15A1P39059 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
COL15A1P39059 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 AL390195.2-201ENST00000564771 2023 ntBASIC9.18□□□□□ -0.94
COL15A1P39059 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC9.18□□□□□ -0.94
COL15A1P39059 AC090983.1-201ENST00000623426 3897 ntBASIC9.18□□□□□ -0.94
COL15A1P39059 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 AL136100.1-201ENST00000407696 330 ntBASIC9.18□□□□□ -0.94
COL15A1P39059 RN7SKP91-201ENST00000410852 288 ntBASIC9.18□□□□□ -0.94
COL15A1P39059 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC9.18□□□□□ -0.94
COL15A1P39059 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC9.18□□□□□ -0.94
COL15A1P39059 GAPDHP51-201ENST00000426454 1000 ntBASIC9.18□□□□□ -0.94
COL15A1P39059 RPS14P7-201ENST00000473701 448 ntBASIC9.18□□□□□ -0.94
COL15A1P39059 AL591122.1-201ENST00000487348 492 ntBASIC9.18□□□□□ -0.94
COL15A1P39059 RN7SL649P-201ENST00000496974 275 ntBASIC9.18□□□□□ -0.94
COL15A1P39059 AC009567.2-201ENST00000502989 349 ntBASIC9.18□□□□□ -0.94
COL15A1P39059 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC9.18□□□□□ -0.94
COL15A1P39059 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC9.18□□□□□ -0.94
COL15A1P39059 AC024267.2-201ENST00000582737 417 ntBASIC9.18□□□□□ -0.94
COL15A1P39059 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC9.18□□□□□ -0.94
COL15A1P39059 MIR6849-201ENST00000618543 69 ntBASIC9.18□□□□□ -0.94
COL15A1P39059 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC9.18□□□□□ -0.94
COL15A1P39059 AC140479.4-205ENST00000636339 820 ntBASIC9.18□□□□□ -0.94
COL15A1P39059 MBD5-221ENST00000637159 902 ntTSL 5 BASIC9.18□□□□□ -0.94
COL15A1P39059 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC9.18□□□□□ -0.94
COL15A1P39059 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 HSPD1P10-201ENST00000404829 1676 ntBASIC9.18□□□□□ -0.94
COL15A1P39059 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
COL15A1P39059 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC9.17□□□□□ -0.94
COL15A1P39059 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC9.17□□□□□ -0.94
COL15A1P39059 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
COL15A1P39059 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC9.17□□□□□ -0.94
COL15A1P39059 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC9.17□□□□□ -0.94
COL15A1P39059 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
COL15A1P39059 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
COL15A1P39059 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
COL15A1P39059 AP000766.1-201ENST00000561746 4140 ntBASIC9.17□□□□□ -0.94
COL15A1P39059 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
COL15A1P39059 OR8B9P-202ENST00000642028 5216 ntBASIC9.17□□□□□ -0.94
COL15A1P39059 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
COL15A1P39059 AC121334.1-201ENST00000396414 802 ntBASIC9.17□□□□□ -0.94
COL15A1P39059 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC9.17□□□□□ -0.94
COL15A1P39059 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC9.17□□□□□ -0.94
COL15A1P39059 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC9.17□□□□□ -0.94
COL15A1P39059 AC114324.2-202ENST00000503812 134 ntBASIC9.17□□□□□ -0.94
COL15A1P39059 NREP-217ENST00000509025 987 ntTSL 3 BASIC9.17□□□□□ -0.94
COL15A1P39059 NREP-223ENST00000515855 801 ntTSL 4 BASIC9.17□□□□□ -0.94
COL15A1P39059 RN7SKP183-201ENST00000517169 324 ntBASIC9.17□□□□□ -0.94
COL15A1P39059 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC9.17□□□□□ -0.94
COL15A1P39059 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC9.17□□□□□ -0.94
COL15A1P39059 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC9.17□□□□□ -0.94
COL15A1P39059 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC9.17□□□□□ -0.94
COL15A1P39059 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC9.17□□□□□ -0.94
COL15A1P39059 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC9.17□□□□□ -0.94
COL15A1P39059 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC9.17□□□□□ -0.94
COL15A1P39059 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC9.17□□□□□ -0.94
COL15A1P39059 AC007603.3-201ENST00000636915 979 ntBASIC9.17□□□□□ -0.94
COL15A1P39059 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
COL15A1P39059 AC105342.1-201ENST00000378334 6848 ntBASIC9.17□□□□□ -0.94
COL15A1P39059 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
COL15A1P39059 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
COL15A1P39059 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC9.17□□□□□ -0.94
COL15A1P39059 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
COL15A1P39059 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
COL15A1P39059 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
COL15A1P39059 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC9.17□□□□□ -0.94
COL15A1P39059 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
COL15A1P39059 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC9.17□□□□□ -0.94
COL15A1P39059 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC9.17□□□□□ -0.94
COL15A1P39059 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
COL15A1P39059 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC9.16□□□□□ -0.94
COL15A1P39059 AL035563.1-201ENST00000609087 1539 ntBASIC9.16□□□□□ -0.94
COL15A1P39059 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
COL15A1P39059 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
COL15A1P39059 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
COL15A1P39059 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
COL15A1P39059 MIR152-201ENST00000385212 87 ntBASIC9.16□□□□□ -0.94
COL15A1P39059 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC9.16□□□□□ -0.94
COL15A1P39059 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC9.16□□□□□ -0.94
COL15A1P39059 RPL5P6-201ENST00000425640 886 ntBASIC9.16□□□□□ -0.94
COL15A1P39059 AC009518.3-201ENST00000438972 253 ntBASIC9.16□□□□□ -0.94
COL15A1P39059 RPSAP7-201ENST00000456871 885 ntBASIC9.16□□□□□ -0.94
COL15A1P39059 RPL23P10-201ENST00000468780 412 ntBASIC9.16□□□□□ -0.94
COL15A1P39059 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC9.16□□□□□ -0.94
COL15A1P39059 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms