Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 RBM22P13-201ENST00000569805 1244 ntBASIC6.82□□□□□ -1.32
NCK1P16333 AC020765.1-201ENST00000604296 328 ntBASIC6.82□□□□□ -1.32
NCK1P16333 AC008626.1-201ENST00000604384 255 ntBASIC6.82□□□□□ -1.32
NCK1P16333 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC6.82□□□□□ -1.32
NCK1P16333 AC091544.5-201ENST00000620192 3815 ntBASIC6.82□□□□□ -1.32
NCK1P16333 AC034229.6-201ENST00000623704 224 ntBASIC6.82□□□□□ -1.32
NCK1P16333 AC105339.4-201ENST00000624471 737 ntBASIC6.82□□□□□ -1.32
NCK1P16333 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC6.82□□□□□ -1.32
NCK1P16333 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC6.82□□□□□ -1.32
NCK1P16333 MFSD8-234ENST00000641503 1082 ntBASIC6.82□□□□□ -1.32
NCK1P16333 HCCAT5-202ENST00000642127 1029 ntBASIC6.82□□□□□ -1.32
NCK1P16333 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
NCK1P16333 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
NCK1P16333 HDAC1P1-201ENST00000455482 1445 ntBASIC6.82□□□□□ -1.32
NCK1P16333 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
NCK1P16333 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NCK1P16333 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
NCK1P16333 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NCK1P16333 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NCK1P16333 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NCK1P16333 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.81□□□□□ -1.32
NCK1P16333 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 AL121949.2-201ENST00000403446 1548 ntBASIC6.81□□□□□ -1.32
NCK1P16333 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 CDY3P-201ENST00000454543 1618 ntBASIC6.81□□□□□ -1.32
NCK1P16333 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NCK1P16333 RNU1-47P-201ENST00000362966 163 ntBASIC6.81□□□□□ -1.32
NCK1P16333 GZMB-203ENST00000382542 666 ntTSL 2 BASIC6.81□□□□□ -1.32
NCK1P16333 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 STSP1-201ENST00000412493 1151 ntBASIC6.81□□□□□ -1.32
NCK1P16333 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC6.81□□□□□ -1.32
NCK1P16333 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.81□□□□□ -1.32
NCK1P16333 RBMY2YP-201ENST00000423333 912 ntBASIC6.81□□□□□ -1.32
NCK1P16333 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 RPL7P7-201ENST00000428803 703 ntBASIC6.81□□□□□ -1.32
NCK1P16333 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC6.81□□□□□ -1.32
NCK1P16333 OR3B1P-201ENST00000437536 893 ntBASIC6.81□□□□□ -1.32
NCK1P16333 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.81□□□□□ -1.32
NCK1P16333 AC007000.1-201ENST00000453064 794 ntBASIC6.81□□□□□ -1.32
NCK1P16333 RN7SL160P-201ENST00000468558 284 ntBASIC6.81□□□□□ -1.32
NCK1P16333 RN7SL414P-201ENST00000469545 294 ntBASIC6.81□□□□□ -1.32
NCK1P16333 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NCK1P16333 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.81□□□□□ -1.32
NCK1P16333 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.81□□□□□ -1.32
NCK1P16333 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC6.81□□□□□ -1.32
NCK1P16333 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC6.81□□□□□ -1.32
NCK1P16333 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.81□□□□□ -1.32
NCK1P16333 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.81□□□□□ -1.32
NCK1P16333 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.81□□□□□ -1.32
NCK1P16333 AL355333.1-201ENST00000605632 279 ntBASIC6.81□□□□□ -1.32
NCK1P16333 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.81□□□□□ -1.32
NCK1P16333 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.81□□□□□ -1.32
NCK1P16333 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC6.81□□□□□ -1.32
NCK1P16333 AP002345.2-201ENST00000609961 904 ntBASIC6.81□□□□□ -1.32
NCK1P16333 AL121809.2-201ENST00000613169 341 ntBASIC6.81□□□□□ -1.32
NCK1P16333 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.81□□□□□ -1.32
NCK1P16333 AL731556.2-201ENST00000615610 770 ntBASIC6.81□□□□□ -1.32
NCK1P16333 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
NCK1P16333 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
NCK1P16333 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.81□□□□□ -1.32
NCK1P16333 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.81□□□□□ -1.32
NCK1P16333 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.81□□□□□ -1.32
NCK1P16333 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.81□□□□□ -1.32
NCK1P16333 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.81□□□□□ -1.32
NCK1P16333 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.81□□□□□ -1.32
NCK1P16333 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.81□□□□□ -1.32
NCK1P16333 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NCK1P16333 AL358913.2-201ENST00000553881 1548 ntBASIC6.81□□□□□ -1.32
NCK1P16333 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC6.81□□□□□ -1.32
NCK1P16333 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NCK1P16333 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.8□□□□□ -1.32
NCK1P16333 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NCK1P16333 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NCK1P16333 TATDN2P3-201ENST00000452855 3665 ntBASIC6.8□□□□□ -1.32
NCK1P16333 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
NCK1P16333 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
NCK1P16333 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.8□□□□□ -1.32
NCK1P16333 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.8□□□□□ -1.32
NCK1P16333 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC6.8□□□□□ -1.32
NCK1P16333 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.8□□□□□ -1.32
NCK1P16333 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NCK1P16333 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.8□□□□□ -1.32
NCK1P16333 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.8□□□□□ -1.32
NCK1P16333 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.8□□□□□ -1.32
NCK1P16333 RBMX2P2-201ENST00000257020 946 ntBASIC6.8□□□□□ -1.32
NCK1P16333 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NCK1P16333 RPL12P13-201ENST00000310055 497 ntBASIC6.8□□□□□ -1.32
NCK1P16333 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC6.8□□□□□ -1.32
NCK1P16333 DEFB105B-201ENST00000335510 331 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NCK1P16333 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NCK1P16333 RNU1-16P-201ENST00000365477 164 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms