Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 Z99943.2-201ENST00000507585 266 ntBASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 DCN-207ENST00000546370 586 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 DNM1P31-201ENST00000564149 696 ntBASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AC093283.1-201ENST00000565306 1075 ntBASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AL513218.1-201ENST00000606527 391 ntBASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AC083964.1-201ENST00000607549 630 ntBASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AC243830.3-201ENST00000616810 376 ntBASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AC129908.1-201ENST00000624553 648 ntBASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 NPL-212ENST00000614468 2376 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC5.59□□□□□ -1.52
HLA-DRB4X5D2U9 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HLA-DRB4X5D2U9 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HLA-DRB4X5D2U9 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.59□□□□□ -1.52
HLA-DRB4X5D2U9 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.59□□□□□ -1.52
HLA-DRB4X5D2U9 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.59□□□□□ -1.52
HLA-DRB4X5D2U9 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HLA-DRB4X5D2U9 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HLA-DRB4X5D2U9 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
HLA-DRB4X5D2U9 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 RNU1-16P-201ENST00000365477 164 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 SNORA68-201ENST00000384437 133 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 RAN-201ENST00000392367 780 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 HMGB3P1-201ENST00000393368 573 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 EEF1A1P34-201ENST00000419888 1267 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 GAPDHP51-201ENST00000426454 1000 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 RPSAP49-201ENST00000445182 886 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 RHEBP1-201ENST00000448647 556 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 AC012493.1-201ENST00000453252 760 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 RN7SL751P-201ENST00000473281 284 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 AC233724.10-201ENST00000510454 409 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 ADI1P2-201ENST00000514945 429 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 APEX1-214ENST00000557054 888 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 AL049840.6-202ENST00000603373 279 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 RN7SL760P-201ENST00000607344 270 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms