Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 CASC19-205ENST00000641013 1411 ntBASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRIM48Q8IWZ4 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 IL15-207ENST00000514653 1388 ntTSL 5 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 OR2A20P-201ENST00000479887 2913 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AL109918.1-202ENST00000406724 436 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC069282.1-201ENST00000411911 526 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 BMS1P13-201ENST00000417301 885 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC109638.1-201ENST00000417406 326 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC092447.3-201ENST00000426027 686 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 GTF3AP6-201ENST00000432585 986 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 RPS21P1-201ENST00000434479 247 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 FDPSP8-201ENST00000438304 1089 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 BMS1P11-201ENST00000442351 885 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AL139135.2-201ENST00000445040 433 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 RPL6P24-201ENST00000445338 864 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 HMGN1P5-201ENST00000448591 263 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 RPL7P14-201ENST00000449851 741 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 BMS1P9-201ENST00000457640 885 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 RN7SL338P-201ENST00000481467 293 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 FAM177A1P1-201ENST00000503598 473 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC026700.1-201ENST00000512074 544 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 HIGD1AP9-201ENST00000550710 279 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 MIR3137-201ENST00000577367 75 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 NPM1P45-201ENST00000583151 559 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 AP003068.4-201ENST00000623192 802 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 MAPK10-319ENST00000641459 2542 ntBASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRIM48Q8IWZ4 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.59□□□□□ -1.2
TRIM48Q8IWZ4 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
TRIM48Q8IWZ4 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
TRIM48Q8IWZ4 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.2
TRIM48Q8IWZ4 AC074198.1-201ENST00000506546 1397 ntBASIC7.59□□□□□ -1.2
TRIM48Q8IWZ4 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC7.58□□□□□ -1.2
TRIM48Q8IWZ4 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms