Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RN7SL259P-201ENST00000478499 253 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 RPL5P14-201ENST00000494197 878 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 MRPL49P1-201ENST00000505951 535 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 BCAS2P1-201ENST00000528022 632 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 OOSP1P2-201ENST00000579644 351 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 VDAC1P5-201ENST00000603132 844 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 AC024257.5-201ENST00000612739 531 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 AC010998.3-201ENST00000613871 631 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 AC103564.3-201ENST00000621194 220 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 SEPT14P19-203ENST00000633205 211 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 AC130365.1-201ENST00000530524 1553 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 LSMEM1-201ENST00000312849 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 MKL2-207ENST00000573051 1938 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 LINC00298-201ENST00000426969 2236 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 GUCY1A3-208ENST00000511507 2552 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 FO393415.1-201ENST00000314481 2255 ntTSL 2 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 DLGAP1-AS2-201ENST00000572856 2261 ntTSL 2 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 FGFR2-209ENST00000369056 2650 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 ABI2-211ENST00000422511 2718 ntTSL 5 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 FAM13A-213ENST00000509094 2762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC020661.5-201ENST00000624853 1854 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 DCX-210ENST00000637453 2275 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 TKTL2-201ENST00000280605 2654 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 BPNT1-205ENST00000469520 2737 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 Y_RNA.11-201ENST00000362375 109 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 Y_RNA.813-201ENST00000364639 102 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 RPL5P35-201ENST00000398869 816 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL021407.1-201ENST00000404531 386 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 SNX18P13-201ENST00000412442 529 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 RAP1BP1-201ENST00000412709 553 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL513325.1-201ENST00000417716 1034 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL161742.1-201ENST00000418154 584 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 USP9YP22-201ENST00000438971 294 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC108039.2-201ENST00000440214 359 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL357520.1-201ENST00000441557 453 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 RN7SL776P-201ENST00000493390 268 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 MTND5P5-201ENST00000503764 376 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC020937.1-201ENST00000519677 1013 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 SSU72P6-201ENST00000532644 488 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC027544.1-201ENST00000538408 433 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL512310.9-201ENST00000553311 948 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 LINC01572-203ENST00000563823 563 ntTSL 4 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC092133.1-201ENST00000565828 719 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 EIF1P4-201ENST00000572664 335 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 SLC25A36P1-201ENST00000590111 465 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC112230.1-201ENST00000604342 547 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL021807.1-201ENST00000607175 565 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL136985.2-201ENST00000607372 535 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC026367.3-201ENST00000619032 590 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AP003068.4-201ENST00000623192 802 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC067852.7-201ENST00000623270 535 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC016582.3-206ENST00000636547 207 ntBASIC9.47□□□□□ -0.89
ALDH1A1P00352 AOAH-211ENST00000617537 2381 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 RBM18-201ENST00000417201 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC9.47□□□□□ -0.89
ALDH1A1P00352 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALDH1A1P00352 SLAMF7-207ENST00000458602 2449 ntTSL 2 BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms