Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 OR2AH1P-202ENST00000641232 2744 ntBASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DRB4X5D2U9 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AL136981.1-203ENST00000451452 3844 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC011008.2-201ENST00000624866 3352 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 EEF1A1P4-201ENST00000359165 1405 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 MIR575-201ENST00000385013 94 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 GNAI2P2-201ENST00000417003 916 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 RPL5P28-201ENST00000418634 693 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC008753.1-201ENST00000423096 284 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 FABP5P1-201ENST00000423401 411 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 KRTAP3-4P-201ENST00000430780 280 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 FABP5P2-201ENST00000439042 408 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC087499.3-202ENST00000441215 1173 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC002553.1-201ENST00000442828 802 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 CEACAMP3-202ENST00000483806 638 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 NPY6R-201ENST00000503807 1112 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC095059.2-201ENST00000510601 933 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC026700.1-201ENST00000512074 544 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 SNX18P27-201ENST00000523611 779 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC092133.1-201ENST00000565828 719 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC103724.4-201ENST00000605981 292 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 KDM5DP1-201ENST00000622542 298 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AP003068.4-201ENST00000623192 802 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC016582.3-206ENST00000636547 207 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AC018688.1-201ENST00000636528 1754 ntBASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DRB4X5D2U9 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AC138915.4-201ENST00000565549 4147 ntBASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 PPCS-204ENST00000372562 966 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 MIR498-201ENST00000385134 124 ntBASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 NUS1P4-201ENST00000401550 585 ntBASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 RPSAP59-201ENST00000421048 890 ntBASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DRB4X5D2U9 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms