Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 RN7SKP174-201ENST00000363803 330 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AL034372.1-201ENST00000407586 754 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 RPL5P28-201ENST00000418634 693 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 RN7SL180P-201ENST00000466769 294 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 RN7SL124P-201ENST00000498656 285 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 SSX8-201ENST00000506270 579 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 U47924.1-201ENST00000606539 434 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC143336.1-201ENST00000614164 836 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC005790.1-201ENST00000619774 450 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 PFN1P2-202ENST00000621347 397 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 MIR6723-201ENST00000621981 89 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC079456.1-201ENST00000624010 480 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC233280.20-201ENST00000637412 416 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC007923.2-201ENST00000584218 1591 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AL132656.3-201ENST00000606384 1595 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 NBPF8-201ENST00000583271 5330 ntBASIC6.59□□□□□ -1.35
LINC00346Q8IVM7 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.59□□□□□ -1.36
LINC00346Q8IVM7 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
LINC00346Q8IVM7 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
LINC00346Q8IVM7 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
LINC00346Q8IVM7 MFSD8-217ENST00000641178 4374 ntBASIC6.59□□□□□ -1.36
LINC00346Q8IVM7 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
LINC00346Q8IVM7 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
LINC00346Q8IVM7 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
LINC00346Q8IVM7 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
LINC00346Q8IVM7 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.59□□□□□ -1.36
LINC00346Q8IVM7 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 AP002364.1-201ENST00000623330 3386 ntBASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 SNORA35-201ENST00000386104 128 ntBASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 HMGB3P1-201ENST00000393368 573 ntBASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 MSRB1P1-201ENST00000396851 354 ntBASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 AL050305.1-201ENST00000399993 1230 ntBASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 MED15P8-201ENST00000411601 545 ntBASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 SNX18P3-201ENST00000424993 835 ntBASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 TRGV7-201ENST00000427089 353 ntBASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 KRT18P53-201ENST00000431919 117 ntBASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 RPL22P11-201ENST00000434894 385 ntBASIC6.58□□□□□ -1.36
LINC00346Q8IVM7 AL606752.1-201ENST00000435442 666 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms