Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
P04436 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
P04436 QRSL1P3-201ENST00000552666 1316 ntBASIC6.75□□□□□ -1.33
P04436 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
P04436 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
P04436 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.74□□□□□ -1.33
P04436 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC6.74□□□□□ -1.33
P04436 AL136298.2-201ENST00000556497 1570 ntBASIC6.74□□□□□ -1.33
P04436 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC6.74□□□□□ -1.33
P04436 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
P04436 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC6.74□□□□□ -1.33
P04436 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC6.74□□□□□ -1.33
P04436 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 AC023886.2-201ENST00000321285 411 ntBASIC6.74□□□□□ -1.33
P04436 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC6.74□□□□□ -1.33
P04436 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
P04436 AL117344.1-201ENST00000407196 616 ntBASIC6.74□□□□□ -1.33
P04436 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.74□□□□□ -1.33
P04436 RPL34P19-201ENST00000415903 342 ntBASIC6.74□□□□□ -1.33
P04436 OR7E117P-201ENST00000422682 1112 ntBASIC6.74□□□□□ -1.33
P04436 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.74□□□□□ -1.33
P04436 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.74□□□□□ -1.33
P04436 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.74□□□□□ -1.33
P04436 RHEBP1-201ENST00000448647 556 ntBASIC6.74□□□□□ -1.33
P04436 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.74□□□□□ -1.33
P04436 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.74□□□□□ -1.33
P04436 AC022296.2-201ENST00000512424 202 ntBASIC6.74□□□□□ -1.33
P04436 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.74□□□□□ -1.33
P04436 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.74□□□□□ -1.33
P04436 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.74□□□□□ -1.33
P04436 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.74□□□□□ -1.33
P04436 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.74□□□□□ -1.33
P04436 UBE2CP1-201ENST00000557130 554 ntBASIC6.74□□□□□ -1.33
P04436 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.74□□□□□ -1.33
P04436 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.74□□□□□ -1.33
P04436 AC092368.2-201ENST00000565911 600 ntBASIC6.74□□□□□ -1.33
P04436 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
P04436 AC011193.2-201ENST00000582638 367 ntBASIC6.74□□□□□ -1.33
P04436 AP001554.1-201ENST00000604533 376 ntBASIC6.74□□□□□ -1.33
P04436 AC012640.3-201ENST00000607847 430 ntBASIC6.74□□□□□ -1.33
P04436 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC6.74□□□□□ -1.33
P04436 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.74□□□□□ -1.33
P04436 CASC19-208ENST00000641056 1292 ntBASIC6.74□□□□□ -1.33
P04436 CASC19-227ENST00000641411 1285 ntBASIC6.74□□□□□ -1.33
P04436 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.74□□□□□ -1.33
P04436 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
P04436 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.74□□□□□ -1.33
P04436 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
P04436 XRCC6P5-201ENST00000435236 1795 ntBASIC6.74□□□□□ -1.33
P04436 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC6.74□□□□□ -1.33
P04436 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC6.74□□□□□ -1.33
P04436 AL390195.2-201ENST00000564771 2023 ntBASIC6.74□□□□□ -1.33
P04436 THAP12P7-201ENST00000520248 2290 ntBASIC6.74□□□□□ -1.33
P04436 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC6.74□□□□□ -1.33
P04436 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
P04436 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
P04436 AC007923.2-201ENST00000584218 1591 ntBASIC6.74□□□□□ -1.33
P04436 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P04436 ARHGAP42P5-201ENST00000548856 2936 ntBASIC6.73□□□□□ -1.33
P04436 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P04436 RPL12P38-202ENST00000588627 2319 ntBASIC6.73□□□□□ -1.33
P04436 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.73□□□□□ -1.33
P04436 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P04436 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.73□□□□□ -1.33
P04436 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
P04436 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.73□□□□□ -1.33
P04436 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
P04436 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
P04436 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
P04436 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
P04436 SNORA68-201ENST00000384437 133 ntBASIC6.73□□□□□ -1.33
P04436 FDPSP1-201ENST00000424976 1071 ntBASIC6.73□□□□□ -1.33
P04436 AC087499.3-202ENST00000441215 1173 ntBASIC6.73□□□□□ -1.33
P04436 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.73□□□□□ -1.33
P04436 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.73□□□□□ -1.33
P04436 PMS2P11-201ENST00000451831 574 ntBASIC6.73□□□□□ -1.33
P04436 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.73□□□□□ -1.33
P04436 AC040975.1-201ENST00000472104 316 ntBASIC6.73□□□□□ -1.33
P04436 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC6.73□□□□□ -1.33
P04436 HNRNPA1P17-201ENST00000496620 924 ntBASIC6.73□□□□□ -1.33
P04436 OR4C1P-201ENST00000530880 937 ntBASIC6.73□□□□□ -1.33
P04436 OR5F2P-201ENST00000532761 941 ntBASIC6.73□□□□□ -1.33
P04436 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC6.73□□□□□ -1.33
P04436 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.73□□□□□ -1.33
P04436 CRADD-210ENST00000552033 622 ntTSL 3 BASIC6.73□□□□□ -1.33
P04436 AC233290.1-201ENST00000553021 1186 ntBASIC6.73□□□□□ -1.33
P04436 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms