Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MEFV-202ENST00000339854 2959 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 PTPRA-202ENST00000318266 3219 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
ALDH1A1P00352 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ALDH1A1P00352 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 NLGN4X-208ENST00000538097 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 MARK2P10-201ENST00000454959 1437 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 WDR47-205ENST00000400794 4134 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 LILRA2-201ENST00000251376 4429 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 METTL15-204ENST00000407364 4242 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AL451046.1-201ENST00000406097 534 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 CCNYL3-201ENST00000407030 998 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC244157.1-201ENST00000415642 163 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 GUSBP4-201ENST00000423899 672 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 OSTCP5-201ENST00000425293 453 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 DPRXP1-201ENST00000426312 460 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AL606490.8-201ENST00000441624 319 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 AL118496.2-201ENST00000448300 230 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 FTH1P7-201ENST00000450676 552 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 ATG10-AS1-201ENST00000504846 648 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC113420.1-201ENST00000507903 571 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC010442.1-201ENST00000515583 816 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 MTCO2P15-201ENST00000532655 656 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC008759.1-201ENST00000589783 983 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 EXOSC3P2-201ENST00000594464 497 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC124312.4-201ENST00000605533 310 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC106782.6-201ENST00000611264 512 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC098590.2-201ENST00000614787 281 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC008083.4-201ENST00000615076 444 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC002401.3-201ENST00000620020 440 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC090897.3-201ENST00000636973 1157 ntBASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 RCAN1-208ENST00000482533 2686 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 OTOA-204ENST00000388958 3610 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC025283.2-203ENST00000618352 2905 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 KAT14-206ENST00000489634 3152 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC009948.1-205ENST00000453026 2007 ntTSL 3 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 GLI1-208ENST00000546141 3475 ntTSL 5 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AC027045.2-201ENST00000634974 1571 ntTSL 5 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 GDNF-AS1-205ENST00000637926 3819 ntTSL 5 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 CDH23-203ENST00000398788 4329 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 MCOLN2-202ENST00000370608 2871 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 ANKRD55-203ENST00000504958 2139 ntTSL 5 BASIC9.49□□□□□ -0.89
ALDH1A1P00352 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ALDH1A1P00352 AL359852.1-201ENST00000624609 2197 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 CASP12-203ENST00000422698 1685 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 ZNF876P-202ENST00000398732 1485 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 LINC00943-203ENST00000535544 2815 ntTSL 2 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 CDRT1-204ENST00000395906 2571 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 POLR2D-203ENST00000409955 1758 ntTSL 2 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 FGG-204ENST00000405164 1539 ntTSL 5 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 AL583836.1-201ENST00000464755 2395 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 CYP2C9-201ENST00000260682 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALDH1A1P00352 AL512310.11-201ENST00000611741 1837 ntTSL 5 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 SNORD51.1-201ENST00000365405 77 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 RNU5A-2P-201ENST00000384337 116 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 FIGN-202ENST00000409634 746 ntTSL 5 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 AC009237.9-201ENST00000414800 347 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 GLUD1P9-201ENST00000420997 1173 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC9.48□□□□□ -0.89
ALDH1A1P00352 NBPF2P-201ENST00000453025 661 ntBASIC9.48□□□□□ -0.89
ALDH1A1P00352 AL356390.1-201ENST00000455684 397 ntBASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms