Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AC015871.3-201ENST00000618835 2261 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 CYP2G2P-201ENST00000594920 1485 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AL513523.1-201ENST00000417868 1309 ntBASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 SLC9B1P3-201ENST00000452667 1334 ntBASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 SNORA35-201ENST00000386104 128 ntBASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 SUMO2P13-201ENST00000403109 272 ntBASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 CTSLP8-201ENST00000413075 967 ntBASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AP003499.1-201ENST00000527217 574 ntBASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AC027667.1-201ENST00000545814 304 ntBASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AC138749.2-201ENST00000566048 167 ntBASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 CARSP1-201ENST00000603171 889 ntBASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AL096855.2-201ENST00000605785 369 ntBASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 AC087885.1-201ENST00000641910 848 ntBASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNB1IP1Q9NPC3 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
CCNB1IP1Q9NPC3 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
CCNB1IP1Q9NPC3 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AL133320.1-201ENST00000621423 2352 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 MIR555-201ENST00000384987 96 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC011753.4-201ENST00000417974 311 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AL358942.1-201ENST00000418595 1178 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 RPL19P21-201ENST00000424919 591 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC091390.2-201ENST00000432573 374 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AL031736.1-201ENST00000449688 618 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 RN7SL685P-201ENST00000476271 298 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 CCNC-215ENST00000523799 1035 ntTSL 3 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AP004833.3-201ENST00000531893 322 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AP005597.1-201ENST00000534192 802 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC025252.2-201ENST00000537470 502 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC008870.2-201ENST00000568262 1024 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AL590560.2-201ENST00000608430 732 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC020910.4-201ENST00000612269 540 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms