Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX3Q99909 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX3Q99909 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX3Q99909 AC104117.5-201ENST00000606195 547 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 RN7SL840P-201ENST00000606883 284 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 CGA-202ENST00000610310 615 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX3Q99909 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX3Q99909 AC010320.5-201ENST00000619124 676 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 AC005609.2-201ENST00000623320 592 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX3Q99909 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
SSX3Q99909 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX3Q99909 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSX3Q99909 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.4□□□□□ -1.39
SSX3Q99909 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSX3Q99909 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSX3Q99909 WBP11P1-201ENST00000562560 1931 ntBASIC6.4□□□□□ -1.39
SSX3Q99909 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.4□□□□□ -1.39
SSX3Q99909 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SSX3Q99909 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
SSX3Q99909 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SSX3Q99909 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSX3Q99909 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSX3Q99909 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.39
SSX3Q99909 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSX3Q99909 AL161901.1-201ENST00000624954 3425 ntBASIC6.4□□□□□ -1.39
SSX3Q99909 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SSX3Q99909 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SSX3Q99909 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SSX3Q99909 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX3Q99909 XRCC6P2-201ENST00000457831 1822 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
SSX3Q99909 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSX3Q99909 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX3Q99909 RNA5SP463-201ENST00000363030 120 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSX3Q99909 PHBP1-201ENST00000392260 808 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX3Q99909 CRIP1P3-201ENST00000416794 220 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX3Q99909 AC016877.1-201ENST00000420417 464 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX3Q99909 PAICSP1-201ENST00000425324 1217 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX3Q99909 PYHIN5P-201ENST00000431627 723 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 RBMY2AP-201ENST00000445405 1157 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 RBMY2CP-201ENST00000448575 1157 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 RBMY2DP-202ENST00000448881 1157 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX3Q99909 FTH1P7-201ENST00000450676 552 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 RPL7AP56-201ENST00000476420 791 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 AC090142.2-201ENST00000483263 416 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 AC009269.1-202ENST00000484381 469 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX3Q99909 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX3Q99909 AC138866.1-201ENST00000514522 497 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC6.39□□□□□ -1.39
SSX3Q99909 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX3Q99909 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
SSX3Q99909 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX3Q99909 AL109918.2-201ENST00000605188 279 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 AC016252.1-201ENST00000609721 474 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC6.39□□□□□ -1.39
SSX3Q99909 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SSX3Q99909 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.39□□□□□ -1.39
SSX3Q99909 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC6.39□□□□□ -1.39
SSX3Q99909 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SSX3Q99909 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC6.39□□□□□ -1.39
SSX3Q99909 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC6.39□□□□□ -1.39
SSX3Q99909 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSX3Q99909 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX3Q99909 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX3Q99909 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.39□□□□□ -1.39
SSX3Q99909 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX3Q99909 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SSX3Q99909 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SSX3Q99909 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SSX3Q99909 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
SSX3Q99909 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms