Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL365503.1-201ENST00000605247 905 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC055764.2-201ENST00000610089 670 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 AL590491.1-202ENST00000618038 394 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC239600.2-201ENST00000619615 1165 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC135068.4-201ENST00000622949 925 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 AL162377.2-201ENST00000624532 337 ntBASIC9.64□□□□□ -0.87
LRCH3Q96II8 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 TTF1-203ENST00000612514 1780 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 AL109811.4-201ENST00000614757 1793 ntTSL 5 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 PRUNE1-204ENST00000368936 2788 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 FAM13C-214ENST00000611933 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 ASB11-202ENST00000380470 2748 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 DDX24-210ENST00000622786 1730 ntTSL 5 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 C11orf57-201ENST00000280352 3693 ntAPPRIS ALT1 TSL 2 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 CLDN2-202ENST00000540876 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 BZW2-202ENST00000405202 1689 ntTSL 5 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 HCAR3-201ENST00000528880 2137 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 CIDEB-203ENST00000554411 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LRCH3Q96II8 PTAFR-203ENST00000539896 4191 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
LRCH3Q96II8 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 AC027045.2-201ENST00000634974 1571 ntTSL 5 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 NLRP1-203ENST00000345221 4656 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 NLRP1-217ENST00000619223 4698 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 FIGNL1-211ENST00000611938 3543 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 C10orf126-202ENST00000614533 1968 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 GPRC5D-AS1-202ENST00000499948 1746 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 TMEM161B-201ENST00000296595 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 LMLN-201ENST00000330198 7043 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 RNU4-21P-201ENST00000362802 126 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 RN7SKP133-201ENST00000364845 340 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 MIR185-201ENST00000385288 82 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 ERHP2-201ENST00000402323 299 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 LINC02539-201ENST00000411615 737 ntTSL 2 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 CTSLP8-201ENST00000413075 967 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 VN1R36P-201ENST00000414936 291 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 AC109638.1-201ENST00000417406 326 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 TRIM43CP-201ENST00000422468 1028 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 HIGD1AP12-201ENST00000427832 281 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 PCBP1-AS1-233ENST00000442326 668 ntTSL 3 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 RPSAP76-201ENST00000444599 853 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 RPL36AP55-201ENST00000454114 305 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 GAPDHP35-201ENST00000513369 976 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 RNA5SP75-201ENST00000516841 111 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 HMGB1P46-201ENST00000520062 610 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 AC004923.2-201ENST00000529649 369 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 AC007221.1-201ENST00000570038 796 ntTSL 5 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 PDLIM1P2-201ENST00000582923 607 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 AC008734.2-201ENST00000595277 477 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 AL138999.1-201ENST00000612824 501 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 TMEM182-211ENST00000640575 1155 ntTSL 5 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 PDHA2-201ENST00000295266 1456 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 FAM71B-201ENST00000302938 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 TPD52L3-202ENST00000344545 2296 ntAPPRIS P4 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 ACAD10-220ENST00000549590 2888 ntTSL 5 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 ZNF662-204ENST00000440367 4099 ntTSL 2 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 AC026877.1-201ENST00000476047 1411 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 TRIM49D2-201ENST00000526396 1411 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 CENPL-201ENST00000345664 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 RSL24D1-201ENST00000260443 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 ZWILCH-201ENST00000307897 3960 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LRCH3Q96II8 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC9.63□□□□□ -0.87
LRCH3Q96II8 ZNF587P1-201ENST00000415378 1386 ntBASIC9.63□□□□□ -0.87
LRCH3Q96II8 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC9.62□□□□□ -0.87
LRCH3Q96II8 SLC22A24-203ENST00000612278 2101 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
LRCH3Q96II8 XPNPEP2-202ENST00000371106 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LRCH3Q96II8 RRP12-203ENST00000414986 4242 ntAPPRIS ALT1 TSL 2 BASIC9.62□□□□□ -0.87
LRCH3Q96II8 FO393415.1-201ENST00000314481 2255 ntTSL 2 BASIC9.62□□□□□ -0.87
LRCH3Q96II8 AC026358.1-201ENST00000539391 2256 ntTSL 3 BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms