Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
PGBD4Q96DM1 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AC145138.1-201ENST00000512908 2851 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 HSP90AB7P-201ENST00000450068 2454 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 RNU1-38P-201ENST00000362817 144 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 ARMCX7P-201ENST00000372828 562 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 TYMSP1-201ENST00000407851 869 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AC019070.1-201ENST00000415008 1024 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AF274573.1-201ENST00000430535 494 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 RSL24D1P2-201ENST00000445584 366 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 FTH1P7-201ENST00000450676 552 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 RN7SL791P-201ENST00000467868 295 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AC233724.10-201ENST00000510454 409 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 RNU6ATAC39P-201ENST00000516309 149 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AC023080.1-201ENST00000551663 931 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 DDX10P2-201ENST00000417796 2614 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 AC127502.2-201ENST00000602663 2351 ntBASIC8.17□□□□□ -1.1
PGBD4Q96DM1 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC8.17□□□□□ -1.1
PGBD4Q96DM1 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 SSX6-201ENST00000376932 562 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 FTOP1-201ENST00000419363 861 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC009303.1-201ENST00000426307 352 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC092646.1-201ENST00000427142 901 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 FECHP1-201ENST00000431896 1214 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 SSXP3-201ENST00000442971 1300 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 RPL36AP55-201ENST00000454114 305 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 RN7SL688P-201ENST00000471754 275 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC008799.2-201ENST00000484429 647 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 SCARNA20.1-201ENST00000516009 138 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 SLC25A51P2-201ENST00000535708 889 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 MIR1273F-201ENST00000580581 99 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AC079414.3-201ENST00000612986 1090 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AP002833.3-201ENST00000625075 2265 ntBASIC8.16□□□□□ -1.1
PGBD4Q96DM1 TEX41-271ENST00000628213 993 ntTSL 5 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
PGBD4Q96DM1 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms