Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
CPS1P31327 AC069222.1-201ENST00000608028 3360 ntBASIC10.19□□□□□ -0.78
CPS1P31327 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CPS1P31327 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC10.19□□□□□ -0.78
CPS1P31327 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC10.19□□□□□ -0.78
CPS1P31327 AL121578.2-201ENST00000448797 447 ntBASIC10.19□□□□□ -0.78
CPS1P31327 AL024493.1-201ENST00000449217 833 ntBASIC10.19□□□□□ -0.78
CPS1P31327 AC040975.1-201ENST00000472104 316 ntBASIC10.19□□□□□ -0.78
CPS1P31327 AC113367.2-201ENST00000505749 160 ntBASIC10.19□□□□□ -0.78
CPS1P31327 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC10.19□□□□□ -0.78
CPS1P31327 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CPS1P31327 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CPS1P31327 RERE-203ENST00000400907 2973 ntTSL 5 BASIC10.19□□□□□ -0.78
CPS1P31327 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC10.19□□□□□ -0.78
CPS1P31327 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC10.19□□□□□ -0.78
CPS1P31327 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CPS1P31327 ST7-203ENST00000393443 2360 ntTSL 2 BASIC10.19□□□□□ -0.78
CPS1P31327 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC10.19□□□□□ -0.78
CPS1P31327 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC10.19□□□□□ -0.78
CPS1P31327 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CPS1P31327 ZNF333-201ENST00000292530 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CPS1P31327 ZNF322-208ENST00000622479 4882 ntAPPRIS P1 TSL 4 BASIC10.19□□□□□ -0.78
CPS1P31327 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CPS1P31327 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
CPS1P31327 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CPS1P31327 AC009135.2-201ENST00000624136 1768 ntBASIC10.19□□□□□ -0.78
CPS1P31327 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CPS1P31327 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CPS1P31327 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CPS1P31327 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CPS1P31327 AL451046.1-201ENST00000406097 534 ntBASIC10.18□□□□□ -0.78
CPS1P31327 AC007679.3-201ENST00000434035 414 ntBASIC10.18□□□□□ -0.78
CPS1P31327 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CPS1P31327 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC10.18□□□□□ -0.78
CPS1P31327 AC008967.1-201ENST00000504843 163 ntBASIC10.18□□□□□ -0.78
CPS1P31327 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC10.18□□□□□ -0.78
CPS1P31327 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CPS1P31327 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC10.18□□□□□ -0.78
CPS1P31327 CNTNAP3P1-201ENST00000616657 906 ntBASIC10.18□□□□□ -0.78
CPS1P31327 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC10.18□□□□□ -0.78
CPS1P31327 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC10.18□□□□□ -0.78
CPS1P31327 ARG1-202ENST00000356962 1468 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CPS1P31327 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CPS1P31327 MR1-205ENST00000434571 7479 ntTSL 5 BASIC10.18□□□□□ -0.78
CPS1P31327 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC10.18□□□□□ -0.78
CPS1P31327 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CPS1P31327 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CPS1P31327 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC10.18□□□□□ -0.78
CPS1P31327 APP-209ENST00000440126 2846 ntTSL 2 BASIC10.18□□□□□ -0.78
CPS1P31327 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CPS1P31327 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CPS1P31327 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
CPS1P31327 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CPS1P31327 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CPS1P31327 AC127502.2-201ENST00000602663 2351 ntBASIC10.18□□□□□ -0.78
CPS1P31327 RN7SKP174-201ENST00000363803 330 ntBASIC10.17□□□□□ -0.78
CPS1P31327 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
CPS1P31327 SNORA3.1-201ENST00000408166 111 ntBASIC10.17□□□□□ -0.78
CPS1P31327 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC10.17□□□□□ -0.78
CPS1P31327 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC10.17□□□□□ -0.78
CPS1P31327 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC10.17□□□□□ -0.78
CPS1P31327 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC10.17□□□□□ -0.78
CPS1P31327 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 AC090680.1-201ENST00000464696 860 ntBASIC10.17□□□□□ -0.78
CPS1P31327 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 AC091874.2-201ENST00000505889 720 ntBASIC10.17□□□□□ -0.78
CPS1P31327 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC10.17□□□□□ -0.78
CPS1P31327 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC10.17□□□□□ -0.78
CPS1P31327 AC015801.1-201ENST00000585651 153 ntBASIC10.17□□□□□ -0.78
CPS1P31327 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 PRR13P5-201ENST00000596581 442 ntBASIC10.17□□□□□ -0.78
CPS1P31327 AC012368.3-201ENST00000604190 219 ntBASIC10.17□□□□□ -0.78
CPS1P31327 AC008555.7-201ENST00000605008 583 ntBASIC10.17□□□□□ -0.78
CPS1P31327 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CPS1P31327 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC10.17□□□□□ -0.78
CPS1P31327 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC10.17□□□□□ -0.78
CPS1P31327 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC10.17□□□□□ -0.78
CPS1P31327 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC10.17□□□□□ -0.78
CPS1P31327 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CPS1P31327 RNA5SP198-201ENST00000410376 127 ntBASIC10.17□□□□□ -0.78
CPS1P31327 OR6R1P-201ENST00000431838 940 ntBASIC10.17□□□□□ -0.78
CPS1P31327 RN7SL362P-201ENST00000494228 267 ntBASIC10.17□□□□□ -0.78
CPS1P31327 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC10.17□□□□□ -0.78
CPS1P31327 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC10.17□□□□□ -0.78
CPS1P31327 AL356019.2-201ENST00000556738 3829 ntBASIC10.17□□□□□ -0.78
CPS1P31327 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC10.17□□□□□ -0.78
CPS1P31327 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms