Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 AL022100.1-202ENST00000421214 548 ntBASIC8.67□□□□□ -1.02
HLA-DOAP06340 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 RPS10P14-201ENST00000440748 502 ntBASIC8.67□□□□□ -1.02
HLA-DOAP06340 AC006042.1-201ENST00000449931 524 ntTSL 4 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.67□□□□□ -1.02
HLA-DOAP06340 MYL6P4-201ENST00000477911 453 ntBASIC8.67□□□□□ -1.02
HLA-DOAP06340 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 RPSAP66-201ENST00000592196 606 ntBASIC8.67□□□□□ -1.02
HLA-DOAP06340 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 AC092960.1-201ENST00000604762 351 ntBASIC8.67□□□□□ -1.02
HLA-DOAP06340 AC022001.1-201ENST00000605193 268 ntBASIC8.67□□□□□ -1.02
HLA-DOAP06340 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 AC099654.15-201ENST00000639802 509 ntBASIC8.67□□□□□ -1.02
HLA-DOAP06340 OR7E161P-202ENST00000641994 1033 ntBASIC8.67□□□□□ -1.02
HLA-DOAP06340 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-DOAP06340 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
HLA-DOAP06340 EIF4BP4-201ENST00000441847 1780 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-DOAP06340 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-DOAP06340 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-DOAP06340 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 METTL5-202ENST00000308099 629 ntTSL 3 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 RNU12-2P-201ENST00000364789 156 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-DOAP06340 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 AL356133.1-201ENST00000444762 372 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 AC005517.1-201ENST00000452091 489 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 RBMY2EP-202ENST00000456360 940 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 AL079303.1-201ENST00000486611 463 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 RPL10P7-201ENST00000495649 625 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 AC107952.1-201ENST00000524200 376 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 AC090971.3-201ENST00000557871 1041 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 NDUFA3P4-201ENST00000560814 250 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 AC091932.1-201ENST00000569381 427 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 SIGLEC31P-201ENST00000594237 551 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 AC012065.3-201ENST00000602736 439 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 AL591222.2-201ENST00000604443 754 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 AL121809.2-201ENST00000613169 341 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 AC007671.1-201ENST00000616957 830 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 AC025162.2-201ENST00000619602 560 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-DOAP06340 HYDIN2-203ENST00000614586 13885 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 AC006116.1-201ENST00000587908 2171 ntBASIC8.66□□□□□ -1.02
HLA-DOAP06340 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-DOAP06340 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 THADA-202ENST00000402360 2974 ntTSL 5 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-DOAP06340 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-DOAP06340 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-DOAP06340 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-DOAP06340 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HLA-DOAP06340 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC8.66□□□□□ -1.02
HLA-DOAP06340 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.65□□□□□ -1.02
HLA-DOAP06340 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-DOAP06340 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-DOAP06340 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-DOAP06340 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-DOAP06340 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.65□□□□□ -1.02
HLA-DOAP06340 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
HLA-DOAP06340 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
HLA-DOAP06340 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
HLA-DOAP06340 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms