Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC026464.2-201ENST00000567834 2421 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 MIR301B-201ENST00000390813 78 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 AC004986.1-201ENST00000414855 607 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 OR51A6P-201ENST00000418680 1004 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 GAPDHP55-201ENST00000423136 803 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 FBP2P1-202ENST00000424473 530 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 FTH1P5-201ENST00000425761 545 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 MTATP6P11-201ENST00000428071 670 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 AP000949.1-201ENST00000438328 629 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 AC019185.3-201ENST00000438805 323 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 LIN28AP2-201ENST00000445283 458 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 TAAR3P-201ENST00000466706 1078 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 TAAR3P-202ENST00000481759 1025 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 RNA5SP287-201ENST00000516358 103 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 EIF4EP5-201ENST00000528228 640 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 AC092474.3-201ENST00000603022 568 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 AC008385.1-201ENST00000604421 355 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 AC018754.1-201ENST00000607486 925 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 SAMMSON-214ENST00000641395 1264 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 WASF5P-205ENST00000428639 1455 ntBASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP1Q96SZ6 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 AC130456.1-201ENST00000565085 1363 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 MAPK10-281ENST00000641170 3070 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 AL359922.2-201ENST00000581788 3017 ntBASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC7.85□□□□□ -1.15
CDK5RAP1Q96SZ6 SS18L2P1-201ENST00000445923 213 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms