Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LRRTM4Q86VH4 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LRRTM4Q86VH4 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.38□□□□□ -1.23
LRRTM4Q86VH4 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LRRTM4Q86VH4 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 CREM-212ENST00000374728 1933 ntTSL 5 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AL078621.1-201ENST00000272567 768 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 RNA5SP260-201ENST00000363849 111 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AL139806.1-201ENST00000403057 1002 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 RN7SKP225-201ENST00000410405 352 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 PPIAP30-201ENST00000415473 519 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 LIN28AP2-201ENST00000445283 458 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 FTH1P7-201ENST00000450676 552 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AC018475.1-201ENST00000478358 465 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AC008676.3-201ENST00000521237 435 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AP001781.2-201ENST00000529841 783 ntTSL 3 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 MIR4685-201ENST00000578185 69 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 MIR4786-201ENST00000583954 80 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AC018558.4-201ENST00000622153 281 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 SNORA43.5-201ENST00000631270 138 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 AP000842.4-201ENST00000638781 748 ntBASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.37□□□□□ -1.23
LRRTM4Q86VH4 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 AP002833.3-201ENST00000625075 2265 ntBASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 TUBBP10-201ENST00000427668 1301 ntBASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 RBMX2P2-201ENST00000257020 946 ntBASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 SNORA73B-201ENST00000363217 204 ntBASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 NXT2-204ENST00000372107 937 ntTSL 3 BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 MIR575-201ENST00000385013 94 ntBASIC7.36□□□□□ -1.23
LRRTM4Q86VH4 MIR301B-201ENST00000390813 78 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms