Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 OR5F2P-201ENST00000532761 941 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AC018523.1-201ENST00000534211 512 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 CRADD-210ENST00000552033 622 ntTSL 3 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 RN7SL697P-201ENST00000582484 299 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AC006116.6-201ENST00000593258 1103 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AP001554.1-201ENST00000604533 376 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 CR382285.1-202ENST00000604687 547 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 RN7SL778P-201ENST00000607160 297 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AC080112.3-201ENST00000612552 880 ntBASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
C9orf40Q8IXQ3 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 AL133320.1-201ENST00000621423 2352 ntBASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 AL157713.1-201ENST00000379752 1531 ntBASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 PPIAP22-201ENST00000358455 498 ntBASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 AL593856.1-201ENST00000419949 805 ntBASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 FDPSP1-201ENST00000424976 1071 ntBASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 RN7SL251P-201ENST00000464175 297 ntBASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 RPL5P15-201ENST00000475870 897 ntBASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 AL589765.5-201ENST00000596133 515 ntBASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 RPS11-203ENST00000596873 583 ntTSL 2 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
C9orf40Q8IXQ3 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 AL139805.2-201ENST00000455305 2433 ntBASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 MORN2-202ENST00000409077 465 ntTSL 5 BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 RPL12P10-201ENST00000413498 498 ntBASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 AL353803.3-201ENST00000444641 335 ntBASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 AL583856.1-201ENST00000454078 1101 ntBASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 CEACAMP3-202ENST00000483806 638 ntBASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.81□□□□□ -1.32
C9orf40Q8IXQ3 OR7E163P-201ENST00000505943 894 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms