Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 HCG18-244ENST00000602516 2890 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC6.96□□□□□ -1.3
SUMO3P55854 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SUMO3P55854 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC6.96□□□□□ -1.3
SUMO3P55854 OR2A20P-201ENST00000479887 2913 ntBASIC6.96□□□□□ -1.3
SUMO3P55854 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC6.96□□□□□ -1.3
SUMO3P55854 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SUMO3P55854 ZNF192P2-201ENST00000402215 1383 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC6.95□□□□□ -1.3
SUMO3P55854 AC074198.1-201ENST00000506546 1397 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
SUMO3P55854 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 AL353898.3-201ENST00000624679 1755 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.95□□□□□ -1.3
SUMO3P55854 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 USP13-203ENST00000496897 2747 ntTSL 2 BASIC6.95□□□□□ -1.3
SUMO3P55854 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC6.95□□□□□ -1.3
SUMO3P55854 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SUMO3P55854 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.95□□□□□ -1.3
SUMO3P55854 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SUMO3P55854 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
SUMO3P55854 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SUMO3P55854 AL139327.1-201ENST00000382988 348 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 GAS8-AS1-201ENST00000408886 435 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 GSTA10P-201ENST00000412182 576 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC6.95□□□□□ -1.3
SUMO3P55854 OR8B9P-201ENST00000419756 925 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 RNF11P2-201ENST00000427702 440 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 DDX11L10-201ENST00000430178 571 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 ANKRD54P1-201ENST00000433115 471 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC6.95□□□□□ -1.3
SUMO3P55854 AC007790.1-201ENST00000439081 782 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.95□□□□□ -1.3
SUMO3P55854 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.95□□□□□ -1.3
SUMO3P55854 RN7SL335P-201ENST00000482790 304 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.95□□□□□ -1.3
SUMO3P55854 AC127024.1-201ENST00000490847 418 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC6.95□□□□□ -1.3
SUMO3P55854 OR51A1P-201ENST00000511110 946 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 AC114801.1-201ENST00000512633 297 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 SETP12-201ENST00000514068 805 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.95□□□□□ -1.3
SUMO3P55854 AP001781.2-201ENST00000529841 783 ntTSL 3 BASIC6.95□□□□□ -1.3
SUMO3P55854 AL355076.3-201ENST00000555838 587 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.95□□□□□ -1.3
SUMO3P55854 AL137802.2-201ENST00000562878 1110 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC6.95□□□□□ -1.3
SUMO3P55854 ANKRD20A19P-203ENST00000602724 295 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 AC139795.3-201ENST00000606358 541 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 MIR6762-201ENST00000613340 86 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 AC021766.1-201ENST00000624404 741 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.95□□□□□ -1.3
SUMO3P55854 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC6.95□□□□□ -1.3
SUMO3P55854 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SUMO3P55854 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.95□□□□□ -1.3
SUMO3P55854 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SUMO3P55854 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SUMO3P55854 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC6.95□□□□□ -1.3
SUMO3P55854 RBM5-AS1-201ENST00000630404 1386 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 HYDIN2-203ENST00000614586 13885 ntBASIC6.95□□□□□ -1.3
SUMO3P55854 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
SUMO3P55854 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC6.94□□□□□ -1.3
SUMO3P55854 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SUMO3P55854 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SUMO3P55854 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC6.94□□□□□ -1.3
SUMO3P55854 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.94□□□□□ -1.3
SUMO3P55854 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SUMO3P55854 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SUMO3P55854 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.94□□□□□ -1.3
SUMO3P55854 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SUMO3P55854 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC6.94□□□□□ -1.3
SUMO3P55854 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SUMO3P55854 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.94□□□□□ -1.3
SUMO3P55854 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SUMO3P55854 RAN-201ENST00000392367 780 ntTSL 5 BASIC6.94□□□□□ -1.3
SUMO3P55854 AL139806.1-201ENST00000403057 1002 ntBASIC6.94□□□□□ -1.3
SUMO3P55854 AL358178.1-201ENST00000407698 397 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms