Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 CD200-202ENST00000383681 1997 ntTSL 2 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 RN7SKP257-201ENST00000364525 309 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 RNA5SP238-201ENST00000365464 120 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 SNORA68-201ENST00000384437 133 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 MIR431-201ENST00000385266 114 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 LARP1P1-201ENST00000407692 292 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 GAPDHP51-201ENST00000426454 1000 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 FUNDC2P2-202ENST00000443452 493 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 RHEBP1-201ENST00000448647 556 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 IGKV1OR2-2-201ENST00000451163 355 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 SNORA35.1-201ENST00000458908 128 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 AC090680.1-201ENST00000464696 860 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 RN7SL751P-201ENST00000473281 284 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 AC084878.1-201ENST00000480555 648 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 RN7SL689P-201ENST00000577215 297 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 AL136139.1-201ENST00000605568 222 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 AC023206.1-201ENST00000605824 298 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 AC113361.1-201ENST00000606683 543 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 AC139792.1-201ENST00000607051 647 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 AL035555.1-201ENST00000404462 1790 ntBASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 IARS-205ENST00000443024 4341 ntTSL 5 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC9.01□□□□□ -0.97
HMG20BQ9P0W2 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC9□□□□□ -0.97
HMG20BQ9P0W2 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC9□□□□□ -0.97
HMG20BQ9P0W2 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC9□□□□□ -0.97
HMG20BQ9P0W2 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 AC125232.1-201ENST00000452554 1408 ntBASIC9□□□□□ -0.97
HMG20BQ9P0W2 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC9□□□□□ -0.97
HMG20BQ9P0W2 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 RNA5SP177-201ENST00000410122 107 ntBASIC9□□□□□ -0.97
HMG20BQ9P0W2 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC9□□□□□ -0.97
HMG20BQ9P0W2 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC9□□□□□ -0.97
HMG20BQ9P0W2 CYP4F34P-201ENST00000425951 481 ntBASIC9□□□□□ -0.97
HMG20BQ9P0W2 RPS19P6-201ENST00000441327 433 ntBASIC9□□□□□ -0.97
HMG20BQ9P0W2 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 RNA5SP75-201ENST00000516841 111 ntBASIC9□□□□□ -0.97
HMG20BQ9P0W2 IGKV1D-32-201ENST00000517449 318 ntBASIC9□□□□□ -0.97
HMG20BQ9P0W2 MIR5010-201ENST00000582846 120 ntBASIC9□□□□□ -0.97
HMG20BQ9P0W2 MIR3159-201ENST00000584572 74 ntBASIC9□□□□□ -0.97
HMG20BQ9P0W2 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC9□□□□□ -0.97
HMG20BQ9P0W2 pRNA.9-201ENST00000618609 89 ntBASIC9□□□□□ -0.97
HMG20BQ9P0W2 AC104447.1-201ENST00000624214 2124 ntBASIC9□□□□□ -0.97
HMG20BQ9P0W2 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC9□□□□□ -0.97
HMG20BQ9P0W2 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC9□□□□□ -0.97
HMG20BQ9P0W2 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC9□□□□□ -0.97
HMG20BQ9P0W2 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
HMG20BQ9P0W2 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
HMG20BQ9P0W2 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HMG20BQ9P0W2 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms