Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC8□□□□□ -1.13
UBE3AQ05086 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC8□□□□□ -1.13
UBE3AQ05086 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8□□□□□ -1.13
UBE3AQ05086 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
UBE3AQ05086 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC8□□□□□ -1.13
UBE3AQ05086 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC8□□□□□ -1.13
UBE3AQ05086 AC104389.2-201ENST00000450768 887 ntBASIC8□□□□□ -1.13
UBE3AQ05086 RPLP0P1-201ENST00000457002 361 ntBASIC8□□□□□ -1.13
UBE3AQ05086 AC007547.2-201ENST00000468802 360 ntBASIC8□□□□□ -1.13
UBE3AQ05086 AC079594.1-201ENST00000489757 331 ntBASIC8□□□□□ -1.13
UBE3AQ05086 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC8□□□□□ -1.13
UBE3AQ05086 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8□□□□□ -1.13
UBE3AQ05086 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC8□□□□□ -1.13
UBE3AQ05086 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC8□□□□□ -1.13
UBE3AQ05086 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC8□□□□□ -1.13
UBE3AQ05086 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC8□□□□□ -1.13
UBE3AQ05086 AC233290.1-201ENST00000553021 1186 ntBASIC8□□□□□ -1.13
UBE3AQ05086 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC8□□□□□ -1.13
UBE3AQ05086 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC8□□□□□ -1.13
UBE3AQ05086 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8□□□□□ -1.13
UBE3AQ05086 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC8□□□□□ -1.13
UBE3AQ05086 AC016629.2-201ENST00000597341 199 ntBASIC8□□□□□ -1.13
UBE3AQ05086 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC8□□□□□ -1.13
UBE3AQ05086 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC8□□□□□ -1.13
UBE3AQ05086 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
UBE3AQ05086 HCFC2P1-201ENST00000392864 1592 ntBASIC8□□□□□ -1.13
UBE3AQ05086 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
UBE3AQ05086 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC8□□□□□ -1.13
UBE3AQ05086 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC8□□□□□ -1.13
UBE3AQ05086 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
UBE3AQ05086 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8□□□□□ -1.13
UBE3AQ05086 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
UBE3AQ05086 MTCO1P46-201ENST00000451639 1491 ntBASIC8□□□□□ -1.13
UBE3AQ05086 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
UBE3AQ05086 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8□□□□□ -1.13
UBE3AQ05086 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
UBE3AQ05086 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.99□□□□□ -1.13
UBE3AQ05086 AC092999.1-201ENST00000624004 1924 ntBASIC7.99□□□□□ -1.13
UBE3AQ05086 AC096745.2-201ENST00000627783 1914 ntBASIC7.99□□□□□ -1.13
UBE3AQ05086 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.99□□□□□ -1.13
UBE3AQ05086 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.99□□□□□ -1.13
UBE3AQ05086 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC7.99□□□□□ -1.13
UBE3AQ05086 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
UBE3AQ05086 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.99□□□□□ -1.13
UBE3AQ05086 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 RNU4-81P-201ENST00000363561 144 ntBASIC7.99□□□□□ -1.13
UBE3AQ05086 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC7.99□□□□□ -1.13
UBE3AQ05086 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
UBE3AQ05086 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.99□□□□□ -1.13
UBE3AQ05086 AL355862.1-201ENST00000412705 353 ntBASIC7.99□□□□□ -1.13
UBE3AQ05086 SMC4P1-201ENST00000414479 527 ntBASIC7.99□□□□□ -1.13
UBE3AQ05086 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.99□□□□□ -1.13
UBE3AQ05086 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC7.99□□□□□ -1.13
UBE3AQ05086 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC7.99□□□□□ -1.13
UBE3AQ05086 OR52E7P-201ENST00000452394 933 ntBASIC7.99□□□□□ -1.13
UBE3AQ05086 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.99□□□□□ -1.13
UBE3AQ05086 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
UBE3AQ05086 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.99□□□□□ -1.13
UBE3AQ05086 HNRNPA1P17-201ENST00000496620 924 ntBASIC7.99□□□□□ -1.13
UBE3AQ05086 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC7.99□□□□□ -1.13
UBE3AQ05086 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.99□□□□□ -1.13
UBE3AQ05086 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.99□□□□□ -1.13
UBE3AQ05086 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
UBE3AQ05086 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.99□□□□□ -1.13
UBE3AQ05086 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC7.99□□□□□ -1.13
UBE3AQ05086 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
UBE3AQ05086 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 AL136298.2-201ENST00000556497 1570 ntBASIC7.99□□□□□ -1.13
UBE3AQ05086 AL139041.1-201ENST00000605480 610 ntBASIC7.99□□□□□ -1.13
UBE3AQ05086 MIR6813-201ENST00000621638 56 ntBASIC7.99□□□□□ -1.13
UBE3AQ05086 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC7.99□□□□□ -1.13
UBE3AQ05086 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC7.99□□□□□ -1.13
UBE3AQ05086 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
UBE3AQ05086 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
UBE3AQ05086 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.98□□□□□ -1.13
UBE3AQ05086 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
UBE3AQ05086 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.98□□□□□ -1.13
UBE3AQ05086 AL161891.1-201ENST00000621575 4636 ntBASIC7.98□□□□□ -1.13
UBE3AQ05086 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
UBE3AQ05086 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
UBE3AQ05086 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC7.98□□□□□ -1.13
UBE3AQ05086 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
UBE3AQ05086 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
UBE3AQ05086 MFSD8-227ENST00000641393 4069 ntBASIC7.98□□□□□ -1.13
UBE3AQ05086 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.98□□□□□ -1.13
UBE3AQ05086 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
UBE3AQ05086 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.98□□□□□ -1.13
UBE3AQ05086 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms