Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 PPIAP30-201ENST00000415473 519 ntBASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 MTND2P12-201ENST00000417560 1252 ntBASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 ELOBP4-201ENST00000423418 296 ntBASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 DKK2-202ENST00000510463 908 ntTSL 3 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 SCARNA20.1-201ENST00000516009 138 ntBASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 SNX18P27-201ENST00000523611 779 ntBASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AC012181.2-201ENST00000570210 699 ntBASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AC040162.2-201ENST00000573092 157 ntBASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AC239803.2-201ENST00000610161 430 ntBASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AC008498.2-201ENST00000624033 2322 ntBASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AC127502.2-201ENST00000602663 2351 ntBASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 GUCY2GP-201ENST00000479705 3222 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 AC016582.1-202ENST00000636341 2982 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 MTCO1P15-201ENST00000529569 1526 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 KYNUP1-201ENST00000466683 1406 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 SNORA51.7-201ENST00000384171 134 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 AL353626.3-201ENST00000413399 657 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 OR7E36P-201ENST00000419933 954 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 SNX18P3-201ENST00000424993 835 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 SNX18P14-201ENST00000429308 574 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 OR5M13P-201ENST00000433944 937 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 CR391992.1-201ENST00000438601 394 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 RPL12P40-201ENST00000467028 488 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 AC117383.2-201ENST00000514722 322 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 MTND1P36-201ENST00000522384 936 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 OR7E96P-201ENST00000530816 976 ntBASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.9□□□□□ -1.14
CDK5RAP1Q96SZ6 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms