Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXG1P55316 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXG1P55316 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXG1P55316 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
FOXG1P55316 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.56□□□□□ -1.36
FOXG1P55316 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
FOXG1P55316 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
FOXG1P55316 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
FOXG1P55316 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.56□□□□□ -1.36
FOXG1P55316 SNORD15A-201ENST00000384214 148 ntBASIC6.56□□□□□ -1.36
FOXG1P55316 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 OR7E36P-201ENST00000419933 954 ntBASIC6.56□□□□□ -1.36
FOXG1P55316 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC6.56□□□□□ -1.36
FOXG1P55316 PPIL1P1-201ENST00000423936 499 ntBASIC6.56□□□□□ -1.36
FOXG1P55316 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC6.56□□□□□ -1.36
FOXG1P55316 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 RPSAP41-201ENST00000439695 860 ntBASIC6.56□□□□□ -1.36
FOXG1P55316 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC6.56□□□□□ -1.36
FOXG1P55316 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 NPY6R-201ENST00000503807 1112 ntBASIC6.56□□□□□ -1.36
FOXG1P55316 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC6.56□□□□□ -1.36
FOXG1P55316 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 AC097460.2-201ENST00000511857 741 ntBASIC6.56□□□□□ -1.36
FOXG1P55316 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
FOXG1P55316 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXG1P55316 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 CUX2P1-201ENST00000606426 298 ntBASIC6.56□□□□□ -1.36
FOXG1P55316 AC016252.1-201ENST00000609721 474 ntBASIC6.56□□□□□ -1.36
FOXG1P55316 FAM27E3-202ENST00000614611 340 ntBASIC6.56□□□□□ -1.36
FOXG1P55316 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXG1P55316 FGL2-202ENST00000637771 989 ntBASIC6.56□□□□□ -1.36
FOXG1P55316 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 SAMMSON-214ENST00000641395 1264 ntBASIC6.56□□□□□ -1.36
FOXG1P55316 OR5AU1-204ENST00000641822 1197 ntBASIC6.56□□□□□ -1.36
FOXG1P55316 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
FOXG1P55316 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
FOXG1P55316 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
FOXG1P55316 AC009948.3-201ENST00000603415 1798 ntBASIC6.56□□□□□ -1.36
FOXG1P55316 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
FOXG1P55316 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXG1P55316 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXG1P55316 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXG1P55316 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
FOXG1P55316 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXG1P55316 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXG1P55316 TUBBP10-201ENST00000427668 1301 ntBASIC6.55□□□□□ -1.36
FOXG1P55316 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
FOXG1P55316 MAPK10-333ENST00000641607 2481 ntBASIC6.55□□□□□ -1.36
FOXG1P55316 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FOXG1P55316 WASF5P-205ENST00000428639 1455 ntBASIC6.55□□□□□ -1.36
FOXG1P55316 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXG1P55316 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
FOXG1P55316 IL24-207ENST00000611909 1621 ntTSL 3 BASIC6.55□□□□□ -1.36
FOXG1P55316 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.55□□□□□ -1.36
FOXG1P55316 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
FOXG1P55316 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXG1P55316 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FOXG1P55316 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXG1P55316 RN7SKP36-201ENST00000363997 312 ntBASIC6.55□□□□□ -1.36
FOXG1P55316 RNA5SP396-201ENST00000364834 120 ntBASIC6.55□□□□□ -1.36
FOXG1P55316 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXG1P55316 MIR575-201ENST00000385013 94 ntBASIC6.55□□□□□ -1.36
FOXG1P55316 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
FOXG1P55316 AL139806.1-201ENST00000403057 1002 ntBASIC6.55□□□□□ -1.36
FOXG1P55316 RAC1P4-201ENST00000419413 579 ntBASIC6.55□□□□□ -1.36
FOXG1P55316 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXG1P55316 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms