Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC8.56□□□□□ -1.04
POLR2AP24928 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC8.56□□□□□ -1.04
POLR2AP24928 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
POLR2AP24928 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC8.56□□□□□ -1.04
POLR2AP24928 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.56□□□□□ -1.04
POLR2AP24928 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
POLR2AP24928 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.55□□□□□ -1.04
POLR2AP24928 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
POLR2AP24928 MIR1272-201ENST00000408106 129 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC8.55□□□□□ -1.04
POLR2AP24928 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC8.55□□□□□ -1.04
POLR2AP24928 RPL23AP8-201ENST00000479812 475 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 AC100854.1-201ENST00000520351 341 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 AC007068.2-201ENST00000543168 395 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC8.55□□□□□ -1.04
POLR2AP24928 AC011447.2-201ENST00000592921 283 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 AC111152.1-202ENST00000635848 339 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
POLR2AP24928 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
POLR2AP24928 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.55□□□□□ -1.04
POLR2AP24928 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
POLR2AP24928 AC016930.1-201ENST00000468766 2205 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 SMIM2-AS1-203ENST00000618753 2101 ntTSL 4 BASIC8.55□□□□□ -1.04
POLR2AP24928 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
POLR2AP24928 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
POLR2AP24928 ZNF300-202ENST00000394226 3256 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
POLR2AP24928 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
POLR2AP24928 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC8.55□□□□□ -1.04
POLR2AP24928 AL356361.1-201ENST00000400943 1459 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
POLR2AP24928 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
POLR2AP24928 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
POLR2AP24928 TINAG-203ENST00000370869 782 ntTSL 3 BASIC8.55□□□□□ -1.04
POLR2AP24928 RNA5SP122-201ENST00000384457 108 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.55□□□□□ -1.04
POLR2AP24928 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
POLR2AP24928 RPL7AP71-201ENST00000451120 739 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC8.55□□□□□ -1.04
POLR2AP24928 RN7SL153P-201ENST00000486501 292 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 AL591122.1-201ENST00000487348 492 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 RN7SL568P-201ENST00000493069 298 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC8.55□□□□□ -1.04
POLR2AP24928 AC093816.1-201ENST00000515076 913 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 MIR378C-201ENST00000578683 81 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 AL137246.1-201ENST00000607072 977 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 AC068726.1-201ENST00000610993 341 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 MIR6721-201ENST00000617181 87 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 AL591926.1-201ENST00000620542 217 ntBASIC8.55□□□□□ -1.04
POLR2AP24928 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
POLR2AP24928 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
POLR2AP24928 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC8.55□□□□□ -1.04
POLR2AP24928 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
POLR2AP24928 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
POLR2AP24928 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
POLR2AP24928 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.54□□□□□ -1.04
POLR2AP24928 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
POLR2AP24928 FDPSP5-201ENST00000399474 1057 ntBASIC8.54□□□□□ -1.04
POLR2AP24928 SNORA3.1-201ENST00000408166 111 ntBASIC8.54□□□□□ -1.04
POLR2AP24928 AC079807.1-201ENST00000429993 481 ntBASIC8.54□□□□□ -1.04
POLR2AP24928 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
POLR2AP24928 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
POLR2AP24928 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.54□□□□□ -1.04
POLR2AP24928 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC8.54□□□□□ -1.04
POLR2AP24928 AC134669.1-201ENST00000581275 672 ntBASIC8.54□□□□□ -1.04
POLR2AP24928 AL589765.6-201ENST00000601909 549 ntBASIC8.54□□□□□ -1.04
POLR2AP24928 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC8.54□□□□□ -1.04
POLR2AP24928 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
POLR2AP24928 AC127071.1-201ENST00000624997 712 ntBASIC8.54□□□□□ -1.04
POLR2AP24928 TEX41-293ENST00000630451 690 ntTSL 5 BASIC8.54□□□□□ -1.04
POLR2AP24928 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
POLR2AP24928 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
POLR2AP24928 AC138207.6-201ENST00000579164 1967 ntBASIC8.54□□□□□ -1.04
POLR2AP24928 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
POLR2AP24928 AC022150.4-201ENST00000598322 2848 ntBASIC8.54□□□□□ -1.04
POLR2AP24928 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
POLR2AP24928 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC8.54□□□□□ -1.04
POLR2AP24928 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
POLR2AP24928 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
POLR2AP24928 STAG3L4-201ENST00000352103 530 ntBASIC8.53□□□□□ -1.04
POLR2AP24928 RN7SKP187-201ENST00000365536 330 ntBASIC8.53□□□□□ -1.04
POLR2AP24928 RNA5SP155-201ENST00000411154 129 ntBASIC8.53□□□□□ -1.04
POLR2AP24928 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC8.53□□□□□ -1.04
POLR2AP24928 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC8.53□□□□□ -1.04
POLR2AP24928 RBMY2HP-201ENST00000457961 720 ntBASIC8.53□□□□□ -1.04
POLR2AP24928 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.53□□□□□ -1.04
POLR2AP24928 AC122718.2-201ENST00000505325 591 ntBASIC8.53□□□□□ -1.04
POLR2AP24928 AC108120.1-201ENST00000506543 991 ntBASIC8.53□□□□□ -1.04
POLR2AP24928 RN7SKP11-201ENST00000517018 287 ntBASIC8.53□□□□□ -1.04
POLR2AP24928 IGHV7-34-1-201ENST00000519200 350 ntBASIC8.53□□□□□ -1.04
POLR2AP24928 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC8.53□□□□□ -1.04
POLR2AP24928 AC097376.1-201ENST00000602907 997 ntBASIC8.53□□□□□ -1.04
POLR2AP24928 RPS4XP21-201ENST00000603814 750 ntBASIC8.53□□□□□ -1.04
POLR2AP24928 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC8.53□□□□□ -1.04
POLR2AP24928 AC005753.1-201ENST00000623837 618 ntBASIC8.53□□□□□ -1.04
POLR2AP24928 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms