Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 AC008550.1-201ENST00000511500 884 ntBASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGA6Q9Y5G7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 AC073314.1-201ENST00000568729 2216 ntBASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA6Q9Y5G7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 RN7SL471P-201ENST00000580476 299 ntBASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA6Q9Y5G7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 RPPH1-201ENST00000516869 333 ntBASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms