Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHB3Q9Y5E6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.63■□□□□ 0.73
PCDHB3Q9Y5E6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PCDHB3Q9Y5E6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB3Q9Y5E6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB3Q9Y5E6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PCDHB3Q9Y5E6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 AL589743.5-201ENST00000616611 1050 ntBASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 AL162377.1-201ENST00000618844 1793 ntBASIC19.62■□□□□ 0.73
PCDHB3Q9Y5E6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 KRT17P1-201ENST00000399211 1546 ntBASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 AL355472.2-201ENST00000422958 438 ntBASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB3Q9Y5E6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 AC116050.2-201ENST00000612102 1779 ntBASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB3Q9Y5E6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 AC006058.3-201ENST00000606217 1069 ntBASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB3Q9Y5E6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms