Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.23■■□□□ 1.31
CTDP1Q9Y5B0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.23■■□□□ 1.31
CTDP1Q9Y5B0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CTDP1Q9Y5B0 AL135905.2-201ENST00000584934 1404 ntBASIC23.23■■□□□ 1.31
CTDP1Q9Y5B0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTDP1Q9Y5B0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CTDP1Q9Y5B0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 RPS2P55-201ENST00000397318 883 ntBASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 AC012618.2-201ENST00000428058 849 ntBASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 AC107956.1-201ENST00000494359 873 ntBASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CTDP1Q9Y5B0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CTDP1Q9Y5B0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 AL121829.2-201ENST00000620908 328 ntBASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CTDP1Q9Y5B0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 AC233702.5-201ENST00000584107 538 ntBASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CTDP1Q9Y5B0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 AL121906.2-201ENST00000621597 723 ntBASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTDP1Q9Y5B0 AC124283.5-201ENST00000624661 1809 ntBASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 KRT17P2-201ENST00000300992 1314 ntBASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms