Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 KRT8P20-201ENST00000423953 1409 ntBASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 RPS2P4-201ENST00000476944 856 ntBASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 PTBP1P-201ENST00000554374 1601 ntBASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 AC124283.5-201ENST00000624661 1809 ntBASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 DPP3P2-201ENST00000416030 1696 ntBASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 AC008550.1-201ENST00000511500 884 ntBASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 PRKY-204ENST00000533551 1019 ntBASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 AC124016.1-201ENST00000609552 612 ntBASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00588Q9Y4M8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 AC092720.2-201ENST00000602388 1665 ntBASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 KRASP1-201ENST00000407852 552 ntBASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 AL031963.3-201ENST00000606441 850 ntBASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00588Q9Y4M8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms