Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 AC068338.2-201ENST00000563278 1430 ntBASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 TCF3P1-201ENST00000423021 1937 ntBASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF11Q9Y3C5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 PGM5P4-201ENST00000421970 445 ntBASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF11Q9Y3C5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 AC018445.3-201ENST00000624177 1945 ntBASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 RARRES2P4-201ENST00000514074 484 ntBASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF11Q9Y3C5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF11Q9Y3C5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF11Q9Y3C5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RNF11Q9Y3C5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RNF11Q9Y3C5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF11Q9Y3C5 AC098818.2-201ENST00000564925 2320 ntBASIC19.52■□□□□ 0.72
RNF11Q9Y3C5 BID-214ENST00000617586 542 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF11Q9Y3C5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
RNF11Q9Y3C5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms