Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
NCKAP1Q9Y2A7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 AL049637.2-201ENST00000641778 930 ntBASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.14■□□□□ 0.81
NCKAP1Q9Y2A7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 AL121906.2-201ENST00000621597 723 ntBASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 AC073912.3-201ENST00000624414 853 ntBASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.13■□□□□ 0.81
NCKAP1Q9Y2A7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 FEM1AP4-201ENST00000443167 1987 ntBASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCKAP1Q9Y2A7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NCKAP1Q9Y2A7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 TSPY7P-201ENST00000431358 1114 ntBASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
NCKAP1Q9Y2A7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms