Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CHMP2BQ9UQN3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2BQ9UQN3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP2BQ9UQN3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP2BQ9UQN3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP2BQ9UQN3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP2BQ9UQN3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CHMP2BQ9UQN3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP2BQ9UQN3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP2BQ9UQN3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 AC097381.1-201ENST00000429019 1296 ntBASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP2BQ9UQN3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 AL356652.1-201ENST00000615962 565 ntBASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 TMEM179-206ENST00000616017 1645 ntBASIC20.38■□□□□ 0.85
CHMP2BQ9UQN3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 AC087633.2-202ENST00000565166 1439 ntBASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CHMP2BQ9UQN3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2BQ9UQN3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2BQ9UQN3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms