Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TMPOP1-202ENST00000424642 1267 ntBASIC30.07■■■□□ 2.4
SHANK2Q9UPX8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC30.07■■■□□ 2.4
SHANK2Q9UPX8 RN7SL850P-201ENST00000579959 291 ntBASIC30.07■■■□□ 2.4
SHANK2Q9UPX8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC30.07■■■□□ 2.4
SHANK2Q9UPX8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
SHANK2Q9UPX8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 AC073195.1-201ENST00000607241 877 ntBASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 AC133561.1-201ENST00000568600 2415 ntBASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 AC004264.1-201ENST00000608354 794 ntBASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
SHANK2Q9UPX8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SHANK2Q9UPX8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SHANK2Q9UPX8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC30.05■■■□□ 2.4
SHANK2Q9UPX8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC30.05■■■□□ 2.4
SHANK2Q9UPX8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC30.05■■■□□ 2.4
SHANK2Q9UPX8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SHANK2Q9UPX8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SHANK2Q9UPX8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SHANK2Q9UPX8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC30.05■■■□□ 2.4
SHANK2Q9UPX8 FAM197Y1-201ENST00000421178 764 ntBASIC30.05■■■□□ 2.4
SHANK2Q9UPX8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC30.05■■■□□ 2.4
SHANK2Q9UPX8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC30.05■■■□□ 2.4
SHANK2Q9UPX8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
SHANK2Q9UPX8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC30.04■■■□□ 2.4
SHANK2Q9UPX8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SHANK2Q9UPX8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SHANK2Q9UPX8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
SHANK2Q9UPX8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SHANK2Q9UPX8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SHANK2Q9UPX8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SHANK2Q9UPX8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SHANK2Q9UPX8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SHANK2Q9UPX8 REXO1L10P-201ENST00000615707 1290 ntBASIC30.04■■■□□ 2.4
SHANK2Q9UPX8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SHANK2Q9UPX8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC30.04■■■□□ 2.4
SHANK2Q9UPX8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SHANK2Q9UPX8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
SHANK2Q9UPX8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC30.02■■■□□ 2.4
SHANK2Q9UPX8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
SHANK2Q9UPX8 AC005229.4-201ENST00000610085 2198 ntBASIC30.02■■■□□ 2.4
SHANK2Q9UPX8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC30.02■■■□□ 2.4
SHANK2Q9UPX8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
SHANK2Q9UPX8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
SHANK2Q9UPX8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SHANK2Q9UPX8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SHANK2Q9UPX8 RBM17P1-201ENST00000453646 1190 ntBASIC30.02■■■□□ 2.4
SHANK2Q9UPX8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SHANK2Q9UPX8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SHANK2Q9UPX8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SHANK2Q9UPX8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
SHANK2Q9UPX8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SHANK2Q9UPX8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SHANK2Q9UPX8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
SHANK2Q9UPX8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
SHANK2Q9UPX8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SHANK2Q9UPX8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SHANK2Q9UPX8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SHANK2Q9UPX8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC30■■■□□ 2.39
SHANK2Q9UPX8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC30■■■□□ 2.39
SHANK2Q9UPX8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC30■■■□□ 2.39
SHANK2Q9UPX8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
SHANK2Q9UPX8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC30■■■□□ 2.39
SHANK2Q9UPX8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC30■■■□□ 2.39
SHANK2Q9UPX8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
SHANK2Q9UPX8 KRT8P17-201ENST00000453110 1448 ntBASIC30■■■□□ 2.39
SHANK2Q9UPX8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SHANK2Q9UPX8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC30■■■□□ 2.39
SHANK2Q9UPX8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SHANK2Q9UPX8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC29.99■■■□□ 2.39
SHANK2Q9UPX8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
SHANK2Q9UPX8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SHANK2Q9UPX8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms