Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 EP400NL-214ENST00000641289 2402 ntBASIC18.99■□□□□ 0.63
LHX6Q9UPM6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX6Q9UPM6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.98■□□□□ 0.63
LHX6Q9UPM6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LHX6Q9UPM6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.98■□□□□ 0.63
LHX6Q9UPM6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LHX6Q9UPM6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX6Q9UPM6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.98■□□□□ 0.63
LHX6Q9UPM6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX6Q9UPM6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.98■□□□□ 0.63
LHX6Q9UPM6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.98■□□□□ 0.63
LHX6Q9UPM6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.98■□□□□ 0.63
LHX6Q9UPM6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.98■□□□□ 0.63
LHX6Q9UPM6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.98■□□□□ 0.63
LHX6Q9UPM6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 PKD1P6-201ENST00000343738 4769 ntBASIC18.97■□□□□ 0.63
LHX6Q9UPM6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 AC092053.2-201ENST00000640557 1818 ntBASIC18.97■□□□□ 0.63
LHX6Q9UPM6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX6Q9UPM6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 AL031133.1-201ENST00000406807 723 ntBASIC18.96■□□□□ 0.63
LHX6Q9UPM6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 AL390719.1-204ENST00000412397 1219 ntBASIC18.96■□□□□ 0.63
LHX6Q9UPM6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 CLEC4GP1-201ENST00000596555 870 ntBASIC18.96■□□□□ 0.63
LHX6Q9UPM6 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC18.96■□□□□ 0.63
LHX6Q9UPM6 AL121906.2-201ENST00000621597 723 ntBASIC18.96■□□□□ 0.63
LHX6Q9UPM6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LHX6Q9UPM6 CYP21A1P-202ENST00000354927 1481 ntBASIC18.96■□□□□ 0.63
LHX6Q9UPM6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 AC017007.3-201ENST00000479865 435 ntBASIC18.95■□□□□ 0.62
LHX6Q9UPM6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
LHX6Q9UPM6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LHX6Q9UPM6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
LHX6Q9UPM6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.94■□□□□ 0.62
LHX6Q9UPM6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LHX6Q9UPM6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.94■□□□□ 0.62
LHX6Q9UPM6 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms