Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPA1Q9UND3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPA1Q9UND3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 AC233263.1-201ENST00000578059 224 ntBASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.49■□□□□ 0.55
NPIPA1Q9UND3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 PGM5P4-201ENST00000421970 445 ntBASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 RN7SL471P-201ENST00000580476 299 ntBASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 AC011484.1-201ENST00000377652 1995 ntBASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA1Q9UND3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 AC069544.1-201ENST00000609399 999 ntBASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA1Q9UND3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NPIPA1Q9UND3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPA1Q9UND3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPA1Q9UND3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPA1Q9UND3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPA1Q9UND3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPA1Q9UND3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPA1Q9UND3 POM121L13P-201ENST00000422362 380 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms