Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
L1RE1Q9UN81 KRT18P68-201ENST00000392293 1000 ntBASIC21.93■■□□□ 1.1
L1RE1Q9UN81 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
L1RE1Q9UN81 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
L1RE1Q9UN81 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
L1RE1Q9UN81 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
L1RE1Q9UN81 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
L1RE1Q9UN81 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.93■■□□□ 1.1
L1RE1Q9UN81 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.93■■□□□ 1.1
L1RE1Q9UN81 KRT18P6-201ENST00000555540 1265 ntBASIC21.93■■□□□ 1.1
L1RE1Q9UN81 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.93■■□□□ 1.1
L1RE1Q9UN81 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
L1RE1Q9UN81 AC083880.1-201ENST00000608266 535 ntBASIC21.93■■□□□ 1.1
L1RE1Q9UN81 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.93■■□□□ 1.1
L1RE1Q9UN81 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
L1RE1Q9UN81 PLK5-205ENST00000642079 1969 ntBASIC21.92■■□□□ 1.1
L1RE1Q9UN81 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 SMG8-203ENST00000578922 2178 ntBASIC21.92■■□□□ 1.1
L1RE1Q9UN81 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.92■■□□□ 1.1
L1RE1Q9UN81 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.91■■□□□ 1.1
L1RE1Q9UN81 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 AL589743.5-201ENST00000616611 1050 ntBASIC21.91■■□□□ 1.1
L1RE1Q9UN81 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 AC027702.1-201ENST00000563810 1770 ntBASIC21.91■■□□□ 1.1
L1RE1Q9UN81 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
L1RE1Q9UN81 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
L1RE1Q9UN81 AC087633.2-202ENST00000565166 1439 ntBASIC21.89■■□□□ 1.1
L1RE1Q9UN81 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
L1RE1Q9UN81 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.89■■□□□ 1.1
L1RE1Q9UN81 AC121338.2-201ENST00000622535 1744 ntBASIC21.89■■□□□ 1.1
L1RE1Q9UN81 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
L1RE1Q9UN81 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
L1RE1Q9UN81 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
L1RE1Q9UN81 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
L1RE1Q9UN81 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
L1RE1Q9UN81 AC097658.1-201ENST00000475555 843 ntBASIC21.89■■□□□ 1.09
L1RE1Q9UN81 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.89■■□□□ 1.09
L1RE1Q9UN81 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.89■■□□□ 1.09
L1RE1Q9UN81 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.89■■□□□ 1.09
L1RE1Q9UN81 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms