Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF2Q9P2I0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 AC123595.1-201ENST00000440769 1046 ntBASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 MIR2861-201ENST00000636310 90 ntBASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CPSF2Q9P2I0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 TERF1P2-201ENST00000583350 1212 ntBASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 TCF3P1-201ENST00000423021 1937 ntBASIC20.12■□□□□ 0.81
CPSF2Q9P2I0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 YBX1P1-201ENST00000445822 960 ntBASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 CCDC92B-201ENST00000575506 885 ntBASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPSF2Q9P2I0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 AC090340.1-201ENST00000620778 4980 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms