Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 DPP3P2-201ENST00000416030 1696 ntBASIC16.84■□□□□ 0.29
KCNIP1Q9NZI2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KCNIP1Q9NZI2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KCNIP1Q9NZI2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KCNIP1Q9NZI2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KCNIP1Q9NZI2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KCNIP1Q9NZI2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
KCNIP1Q9NZI2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KCNIP1Q9NZI2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KCNIP1Q9NZI2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KCNIP1Q9NZI2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
KCNIP1Q9NZI2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
KCNIP1Q9NZI2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
KCNIP1Q9NZI2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 AC010536.3-201ENST00000620306 533 ntBASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNIP1Q9NZI2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP1Q9NZI2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 AC137761.2-201ENST00000561729 223 ntBASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 AC145350.3-201ENST00000569033 163 ntBASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 AL356652.1-201ENST00000615962 565 ntBASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 AC013268.1-206ENST00000638368 961 ntBASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 AC112229.1-201ENST00000639295 961 ntBASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP1Q9NZI2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP1Q9NZI2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms