Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 AC097381.1-201ENST00000429019 1296 ntBASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 TERF1P2-201ENST00000583350 1212 ntBASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC42SE2Q9NRR3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 AC005837.3-201ENST00000612163 286 ntBASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 AC019069.1-201ENST00000610008 1333 ntBASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 AC005332.7-201ENST00000614046 2005 ntBASIC13.8□□□□□ -0.2
CDC42SE2Q9NRR3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 AIRN-201ENST00000601203 4374 ntBASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC42SE2Q9NRR3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 TREX1-205ENST00000625293 1783 ntBASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 AC098818.2-201ENST00000564925 2320 ntBASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms