Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 AC092368.3-202ENST00000574180 1591 ntBASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.96■□□□□ 0.63
PRDM9Q9NQV7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRDM9Q9NQV7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 PNMA6B-201ENST00000538162 1200 ntBASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 AL031963.3-201ENST00000606441 850 ntBASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 AC092667.1-201ENST00000434301 2586 ntBASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRDM9Q9NQV7 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 KRT8P17-201ENST00000453110 1448 ntBASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRDM9Q9NQV7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 KRT8P20-201ENST00000423953 1409 ntBASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 HLA-G-202ENST00000376815 851 ntBASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 HLA-G-203ENST00000376818 1127 ntBASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 UNC93B5-201ENST00000530315 699 ntBASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms